Shewanella species W3-18-1 |
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Putative Shewanella species W3-18-1 RM systems
Ref: Copeland,A. et al. unpublished
REBASE ref # 9915
Complete sequence: 4,708,380 bp
GenBank #: CP000503 (NC_008750)
REBASE acronym: SspW3
Org_num: 4662
All begin Sputw3181_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 316 | sigma-54 factor, interaction domain-containing | |||
| 317 | M | M.SspANAORF3794P (97% identity) | M.SspW3ORF317P | |
| 318 | S | S.SbiJAB1ORF1760P (60% identity) | S.SspW3ORF317P | |
| 319 | 281 aa hypothetical protein | |||
| 320 | 225 aa hypothetical protein | |||
| 321 | R | SspANAORF3794P (97% identity) | SspW3ORF317P | |
| 322 | protein of unknown function DUF45 | |||
| 1086 | 307 aa conserved hypothetical protein | |||
| 1087 | M | M.PpaHCORF1015P (100% identity) | M.SspW3ORF1087P | |
| 1088 | S | S.PspV109ORFEP (100% identity) | S.SspW3ORF1087P | |
| 1089 | 387 aa hypothetical protein | |||
| 1090 | R | VpaLCORF12605P (99% identity) | SspW3ORF1087P | |
| 1091 | ATP-binding region, ATPase-like protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2521 | 119 aa hypothetical protein | |||
| 2522 | M | M.Sba223ORF2640P (92% identity) | M1.SspW3ORF2522P | |
| 2523 | M | M.Sba223ORF2642P (93% identity) | M2.SspW3ORF2522P | |
| 2524 | phage protein | |||
| 3843 | 121 aa conserved hypothetical protein | |||
| 3844 | M | M.SpuYZJDamP (100% identity) | GATC | M.SspW3ORF3844P |
| 3845 | Sporulation domain protein | |||
| 4073 | Resolvase, N-terminal domain | |||
| 4074 | M | M.SenS1441ORF23380P (100% identity) | CTGCAG | M.SspW3ORF4074P |
| 4075 | R | Sen8646ORF23075P (100% identity) | CTGCAG | SspW3ORF4074P |
| 4076 | 214 aa conserved hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 322 | protein of unknown function DUF45 | |||
| 323 | R | Aba1081McrBP (12% identity) | SspW3McrBP | |
| 324 | 219 aa conserved hypothetical protein | |||