Neisseria meningitidis serogroup C FAM18 |
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Putative Neisseria meningitidis serogroup C FAM18 RM systems
Ref: Bentley,S.D. et al. PLoS Genet. 3 (2), E23 (2007) In press
REBASE ref # 9934
Complete sequence: 2,194,961 bp
GenBank #: AM421808 (NC_008767)
REBASE acronym: Nme18
Org_num: 4407
All begin NMC
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 59 | transcriptional accessory protein | |||
| 60 | M | M1.NmeMC58ORF76P (100% identity) | GGTGA | M1.Nme18ORF340P |
| 61 | M | M2.NmeMC58ORF76P (98% identity) | M2.Nme18ORF340P | |
| 62 | truncated UDP-glucose 4-epimerase (psedogene) | |||
| 60 | DNA modification methylase | |||
| 61 | M | M2.NmeMC58ORF76P (98% identity) | GGTGA | M.Nme18ORF61P |
| 62 | truncated UDP-glucose 4-epimerase (psedogene) | |||
| 294 | inner membrane protein | |||
| 295 | M | M.NmeM395I (100% identity) | CCTTC | M.Nme18IV |
| 296 | R | Nme8554IP (100% identity) | CCTTC | Nme18IVP |
| 298 | 123 aa hypothetical protein | |||
| 326 | leucyl-tRNA synthetase | |||
| 327 | M | M1.NmeS4ORFAP (99% identity) | GATC | M1.Nme18ORF327P |
| 328 | M | M2.NmeS4ORFAP (100% identity) | GATC | M2.Nme18ORF327P |
| 329 | 184 aa hypothetical protein | |||
| 676 | phenylalanyl-tRNA synthetase alpha | |||
| 678 | V | V.NmeS4ORFGP (100% identity) | RCCGGY | V.Nme18VIP |
| 679 | M | M.NmeS4ORFGP (90% identity) | RCCGGY | M.Nme18VI |
| 680 | R | NmeS4ORFGP (100% identity) | RCCGGY | Nme18VIP |
| 681 | phenylalanyl-tRNA synthetase beta | |||
| 769 | DP-heptose synthetase | |||
| 771 | M | M.NmeS4ORFEP (100% identity) | CCAGA | M.Nme18III |
| 772 | R | NmeS4ORFEP (98% identity) | CCAGA | Nme18IIIP |
| 773 | ADP-L-glycero-D-mannoheptose epimerase | |||
| 1179 | 3-isopropylmalate dehydratase small | |||
| 1180 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Nme18ORF1180P |
| 1181 | R | NmeMBH1ORFHP (99% identity) | GGNNCC | Nme18ORF1180P |
| 1182 | 3-isopropylmalate dehydrogenase | |||
| 1518 | alanyl-tRNA synthetase | |||
| 1519 | R | 340 aa hypothetical protein | GCGCGC | Nme18VP |
| 1520 | M | C-5 cytosine-specific DNA methylase | GCGCGC | M.Nme18V |
| 1521 | transposase for IS1106A3 | |||
| 1987 | DNA helicase | |||
| 1990 | V | V.NmeS4ORFFP (90% identity) | CCGG | V.Nme18IIP |
| 1991 | R | NmeS4ORFFP (97% identity) | CCGG | Nme18IIP |
| 1992 | M | M.NmeS4ORFFP (100% identity) | CCGG | M.Nme18II |
| 1993 | insertion element IS1655 transposase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1192 | 319 aa hypothetical protein | |||
| 1193 | R | NmeS4ORFIP (100% identity) | Nme18ORF1194P | |
| 1194 | M | M.Nme14159ORF5225P (97% identity) | M.Nme18ORF1194P | |
| 1195 | peptidyl-prolyl cis-trans isomerase A | |||
| 1309 | tRNA pseudouridine synthase B | |||
| 1310 | M | M.NgoFA19ORF379P (96% identity) | ACACC | M.Nme18I |
| 1311 | R | NmeAORF1589P (98% identity) | ACACC | Nme18IP |
| 1312 | L-lactate dehydrogenase | |||