Ref: Copeland,A. et al. unpublished

REBASE ref # 9922

Sequence length:GenBank #:
Chromosome: 4,448,856 bp CP000539 (NC_008782)
plasmid pAOVO01: 72,689 bp CP000540 (NC_008765)
plasmid pAOVO02: 63,609 bp CP000541 (NC_008766)

REBASE acronym: AspJS

Org_num: 4670

 

All begin Ajs_

Type I
ORF Gene Most similar Specificity Name
 
Chromosome
 
2615 transcriptional regulator, ArsR family
2616 M M.Dsp3050ORF7015P (99% identity) M.AspJSORF2616P
2617 185 aa hypothetical protein
2618 R Dsp3050ORF7015P (99% identity) AspJSORF2616P
2619 174 aa hypothetical protein
 
3605 SMC domain protein
3606 R Dsp3051ORF16555P (98% identity) AspJSORF3609P
3607 S S.NeuORF2522P (99% identity) S.AspJSORF3609P
3608 transcriptional regulator
3609 M M2.PbaEC28ORF19080P (97% identity) M2.AspJSORF3609P
3610 M M1.PchAW1ORF22475P (98% identity) M1.AspJSORF3609P
3611 65 aa hypothetical protein
Type II
ORF Gene Most similar Specificity Name
 
Chromosome
 
194 two component transcriptional regulator, winged
195 RM Dsp3051ORF12035P (100% identity) AspJSORF195AP
196 DNA-damage-inducible protein D
197 RM M.Dsp3051ORF12025P (90% identity) AspJSORF195BP
198 type III restriction system endonuclease,
 
197 Eco57I restriction endonuclease
198 RM AcrJFORF2421P (80% identity) AspJSORF198P
199 major facilitator superfamily MFS_1
 
425 FAD linked oxidase domain protein
426 M M.TinORF106P (79% identity) RGATCY M.AspJSORF426P
427 R TinORF107P (85% identity) AspJSORF426P
428 formyltetrahydrofolate deformylase
 
565 82 aa hypothetical protein
566 M M.DspMNS0ORF3060P (96% identity) GATC M.AspJSORF566P
567 158 aa conserved hypothetical protein
 
1308 252 aa conserved hypothetical protein
1309 M M.AspJSORF1444P (100% identity) M.AspJSORF1309P
1311 DNA topoisomerase III
 
1443 252 aa conserved hypothetical protein
1444 M M.AspJSORF1309P (100% identity) M.AspJSORF1444P
1445 DNA topoisomerase III
 
2195 phage transcriptional regulator, AlpA
2196 M M.PaeMH27ORF4688P (100% identity) M.AspJSORF2196P
2197 V V.PaeMH27ORF4688P (100% identity) V.AspJSORF2196P
2198 helicase domain protein
 
2198 helicase domain protein
2199 RM Pae14690ORFDP (62% identity) AspJSORF2199AP
2200 transposase, IS204/IS1001/IS1096/IS1165 family
2201 RM Pae14690ORFDP (37% identity) AspJSORF2199BP
2202 DNA mismatch repair enzyme (predicted
 
2201 512 aa hypothetical protein
2202 R PaeMH27ORF4690P (98% identity) GTCGAC AspJSORF2202P
2203 helicase domain protein
 
2529 684 aa conserved hypothetical protein
2530 RM PaePD2aORF4315P (79% identity) AspJSORF2530P
2531 phage transcriptional regulator, AlpA
 
plasmid pAOVO01
 
4213 phosphatidylserine/phosphatidylglycerophosphate/
4214 M M.CteYAZ2ORF49990P (100% identity) M.AspJSORF4214P
4215 73 aa hypothetical protein
 
plasmid pAOVO02
 
4251 72 aa conserved hypothetical protein
4252 M M2.Dac909ORF310P (100% identity) GCCGGC M.AspJSORF4252P
4253 R Dac909ORF310P (100% identity) GCCGGC AspJSORF4252P
4254 68 aa hypothetical protein
 
4257 176 aa conserved hypothetical protein
4258 M M1.Dac909ORF310P (100% identity) M.AspJSORF4258P
4259 143 aa conserved hypothetical protein
Type III
ORF Gene Most similar Specificity Name
 
Chromosome
 
4077 riboflavin synthase alpha chain
4078 R DspMNS0ORF18205P (100% identity) AspJSORF4081P
4079 200 aa hypothetical protein
4080 397 aa conserved hypothetical protein
4081 M M.Dsp3051ORF13700P (98% identity) M.AspJSORF4081P
4082 integral membrane sensor signal transduction
 
4094 Spermine synthase
4095 R Dsp3050ORF18655P (99% identity) AspJSORF4096P
4096 M M.Dsp3051ORF13610P (99% identity) M.AspJSORF4096P
4097 protein of unknown function DUF350