Polaromonas naphthalenivorans CJ2 |
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Putative Polaromonas naphthalenivorans CJ2 RM systems
Ref: Copeland,A. et al. unpublished
REBASE ref # 9932
| Sequence length: | GenBank #: | |
| Chromosome: | 4,410,291 bp | CP000529 (NC_008781) |
| plasmid pPNAP01: | 353,291 bp | CP000530 (NC_008757) |
| plasmid pPNAP03: | 171,866 bp | CP000532 (NC_008759) |
| plasmid pPNAP05: | 58,808 bp | CP000534 (NC_008761) |
| plasmid pPNAP06: | 21,611 bp | CP000535 (NC_008762) |
REBASE acronym: Pna
Org_num: 4676
All begin Pnap_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pPNAP03 | ||||
| 4915 | 68 aa hypothetical protein | |||
| 4916 | M | M.Psp2813ORF9260P (85% identity) | M.PnaORF4916P | |
| 4917 | S | S.Bps5569ORF2776P (37% identity) | S.PnaORF4916P | |
| 4918 | HipA domain protein | |||
| 4923 | 205 aa hypothetical protein | |||
| 4924 | R | Bps5569ORF2776P (77% identity) | PnaORF4924P | |
| 4925 | 480 aa hypothetical protein | |||
| plasmid pPNAP05 | ||||
| 4776 | Cobyrinic acid a,c-diamide synthase | |||
| 4777 | M | M.Psp3121III (92% identity) | M.PnaORF4777P | |
| 4778 | S | S.BspG2V (57% identity) | S.PnaORF4777P | |
| 4779 | protein of unknown function DUF1016 | |||
| 4780 | protein of unknown function DUF1311 | |||
| 4781 | 295 aa hypothetical protein | |||
| 4782 | R | Mpu6NM7TORFEP (87% identity) | PnaORF4777P | |
| 4783 | 351 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2898 | protein of unknown function DUF980 | |||
| 2899 | RM | AspT1ORFOP (17% identity) | PnaORF2899AP | |
| 2900 | transposase | |||
| 2901 | transposase | |||
| 2902 | RM | AspT1ORFOP (38% identity) | PnaORF2899BP | |
| 2903 | 948 aa conserved hypothetical protein | |||
| plasmid pPNAP01 | ||||
| 4282 | 355 aa conserved hypothetical protein | |||
| 4283 | RM | Asp32CORF1160P (64% identity) | PnaORF4283P | |
| 4284 | 389 aa conserved hypothetical protein | |||
| plasmid pPNAP03 | ||||
| 4909 | protein of unknown function DUF88 | |||
| 4910 | M | M.Bge7206ORF23310P (45% identity) | CTGCAG | M.PnaORF4910P |
| 4911 | 943 aa conserved hypothetical protein | |||
| plasmid pPNAP06 | ||||
| 4986 | 265 aa hypothetical protein | |||
| 4987 | RM | AspNO1ORF3216P (40% identity) | PnaORF4987P | |
| 4988 | Plasmid replication initiator protein-like | |||
| 4992 | DnaB domain protein helicase, C-terminal domain | |||
| 4973 | M | M.BlaS1D0ORFAP (65% identity) | M.PnaORF4973P | |
| 4974 | R | Msp2109ORF9715P (10% identity) | PnaORF4973P | |
| 4975 | protein of unknown function DUF262 | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3731 | arsenite efflux ATP-binding protein ArsA | |||
| 3732 | R | PspCG912MrrP (79% identity) | PnaMrrP | |
| 3733 | 4-oxalocrotonate tautomerase family enzyme | |||
| plasmid pPNAP01 | ||||
| 4259 | 479 aa hypothetical protein | |||
| 4260 | R | 778 aa hypothetical protein | PnaMcrBP | |
| 4261 | 631 aa hypothetical protein | |||