Ref: Lucas,S. et al. unpublished

REBASE ref # 15705

Sequence length:GenBank #:
Chromosome: 6,568,739 bp CP002859 (NC_015703)
plasmid pRUNSL02: 93,527 bp CP002861 (NC_015704)
plasmid pRUNSL03: 66,926 bp CP002862 (NC_015694)

REBASE acronym: Rsl19594

Org_num: 7224

 

All begin Runsl_

Type I
ORF Gene Most similar Specificity Name
 
Chromosome
 
3342 phospholipase D/transphosphatidylase
3343 S S2.Nul19294ORF2298P (0% identity) S.Rsl19594ORF3344P
3344 M M.Bba15883ORF3666P (0% identity) M.Rsl19594ORF3344P
3345 R Rps71TORF20390P (0% identity) Rsl19594ORF3344P
3346 integrase family protein
 
3500 fatty acid desaturase
3501 M M.FauTH167ORF11925P (0% identity) M.Rsl19594ORF3501P
3502 S S.Pin1949ORF9185P (0% identity) S1.Rsl19594ORF3501P
3503 transposase
3504 S S.MsaNKSG1ORF5808P (0% identity) S2.Rsl19594ORF3501P
3505 death-on-curing protein
3506 178 aa hypothetical protein
3507 helix-turn-helix domain protein
3508 146 aa hypothetical protein
3509 R FauTH167ORF11925P (0% identity) Rsl19594ORF3501P
3510 396 aa hypothetical protein
 
3892 103 aa hypothetical protein
3893 M M.Csp4102ORF3970P (0% identity) M.Rsl19594ORF3893P
3894 R DfeORF5245P (0% identity) Rsl19594ORF3893P
3895 130 aa hypothetical protein
 
4459 rifampin ADP-ribosyl transferase
4460 R Fbr15ORF1800P (0% identity) Rsl19594ORF4465P
4461 AAA ATPase
4462 S S.Dph13687ORF8780P (0% identity) S.Rsl19594ORF4465P
4463 37 aa hypothetical protein
4464 DUF1016 domain-containing protein
4465 M M.Fba311ORF24900P (0% identity) M.Rsl19594ORF4465P
4466 550 aa hypothetical protein
 
5270 NUDIX hydrolase
5271 M M.Pre8TORF14575P (0% identity) M.Rsl19594ORF5271P
5272 S S2.NurNm15ORF2051P (0% identity) S1.Rsl19594ORF5271P
5273 S S.MoxORF2330P (0% identity) S2.Rsl19594ORF5271P
5274 R Pre8TORF14575P (0% identity) Rsl19594ORF5271P
5275 protein of unknown function DUF45
 
plasmid pRUNSL02
 
5920 protein of unknown function DUF45
5921 R HspAPR13ORF20905P (0% identity) Rsl19594ORF5923P
5922 S S.HspAPR13ORF20905P (0% identity) S.Rsl19594ORF5923P
5923 M M.HspAPR13ORF20905P (0% identity) M.Rsl19594ORF5923P
5924 heavy metal translocating P-type ATPase
Type II
ORF Gene Most similar Specificity Name
 
Chromosome
 
938 transcriptional regulator, LysR family
939 M M.Rsp85ORF13790P (0% identity) CCGG M.Rsl19594ORF939P
940 86 aa hypothetical protein
 
1217 92 aa hypothetical protein
1218 M M.RbiORF14054P (0% identity) M1.Rsl19594ORF1218P
1219 470 aa hypothetical protein
1220 85 aa hypothetical protein
1221 128 aa hypothetical protein
1222 M M.RspSP2ORF7270P (0% identity) GGCC M2.Rsl19594ORF1218P
1223 76 aa hypothetical protein
 
1852 115 aa hypothetical protein
1853 M M.BspMSh1ORFAP (0% identity) M.Rsl19594ORF1853P
1854 682 aa hypothetical protein
 
3021 177 aa Conserved hypothetical protein CHP00701
3022 R FcoPf1ORF209P (0% identity) Rsl19594ORF3022P
3023 Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase
 
3839 111 aa hypothetical protein
3840 RM PmuE5AORF567P (0% identity) Rsl19594ORF3840P
3841 Site-specific DNA-methyltransferase
 
3840 helicase A859L
3841 RM M2.BbaOmORF49P (0% identity) Rsl19594ORF3841P
3842 type III restriction system methylase
 
3841 Site-specific DNA-methyltransferase
3842 RM M1.BbaOmORF49P (0% identity) Rsl19594ORF3842P
3843 5-nucleotidase
 
4267 transcriptional regulator, y4mF family
4268 RM Cta13490ORF951P (0% identity) Rsl19594ORF4268P
4269 1173 aa hypothetical protein
 
4278 1094 aa hypothetical protein
4279 M M.Rsp85ORF2585P (0% identity) M.Rsl19594ORF4279P
4281 342 aa hypothetical protein
4282 R Bfr85BORF10260P (0% identity) Rsl19594ORF4279P
4283 80 aa hypothetical protein
 
4414 67 aa hypothetical protein
4415 R CnoFORF7815P (0% identity) GATC Rsl19594ORF4415P
4416 Domain of unknown function DUF1801
 
5097 magnesium transporter
5098 M M.FmiSK8ORF7795P (0% identity) CTGCAG M.Rsl19594ORF5098P
5099 R Esp427ORF11900P (0% identity) CTGCAG Rsl19594ORF5098P
5100 NmrA family protein
 
plasmid pRUNSL03
 
5851 79 aa hypothetical protein
5852 M M.Csp201ORF19965P (0% identity) CCWGG M.Rsl19594ORF5852P
5853 R CspH6466ORF125P (0% identity) CCWGG Rsl19594ORF5852P
5854 52 aa hypothetical protein
Type III
ORF Gene Most similar Specificity Name
 
Chromosome
 
101 DNA polymerase beta domain protein region
102 R CspCBo1ORF18320P (0% identity) Rsl19594ORF104P
103 129 aa hypothetical protein
104 M M.CspCBo1ORF18320P (0% identity) M.Rsl19594ORF104P
105 cyclic nucleotide-binding protein
 
2424 TonB-dependent receptor
2425 M M.Mos41ORF2130P (0% identity) M.Rsl19594ORF2425P
2426 transposase IS3/is911 family protein
Type IV
ORF Gene Most similar Specificity Name
 
Chromosome
 
3005 dihydrolipoamide dehydrogenase
3006 R FliBUZ3McrC2P (0% identity) Rsl19594McrCP
3007 Ribosome maturation factor rimP
 
5471 289 aa hypothetical protein
5472 R FliBUZ3ORF107P (0% identity) Rsl19594ORF5472P
5473 alpha/beta hydrolase fold protein