Shewanella baltica OS117 |
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Putative Shewanella baltica OS117 RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 13894
| Sequence length: | GenBank #: | |
| Chromosome: | 5,242,964 bp | CP002811 |
| plasmid pSBAL11702: | 91,728 bp | CP002813 |
| plasmid pSBAL11703: | 71,173 bp | CP002814 |
REBASE acronym: Sba117
Org_num: 7150
All begin Sbal117_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 911 | GCN5-related N-acetyltransferase | |||
| 912 | R | SbaOSORF775P (100% identity) | Sba117ORF916P | |
| 913 | anticodon nuclease | |||
| 914 | S | S.SbaOSORF821AP (67% identity) | S.Sba117ORF916P | |
| 915 | protein of unknown function DUF1016 | |||
| 916 | M | M.SbaOSORF821P (100% identity) | M.Sba117ORF916P | |
| 917 | 164 aa hypothetical protein | |||
| 3869 | IstB domain protein ATP-binding protein | |||
| 3870 | M | M.SbaOSORF3715P (100% identity) | M.Sba117ORF3870P | |
| 3871 | anticodon nuclease | |||
| 3872 | S | S.SbaOSORF3715P (100% identity) | S.Sba117ORF3870P | |
| 3873 | protein of unknown function DUF1016 | |||
| 3874 | R | SbaOSORF3715P (99% identity) | Sba117ORF3870P | |
| 3875 | integrase family protein | |||
| 4505 | Protein of unknown function DUF2061, membrane | |||
| 4506 | R | Phe12003IP (97% identity) | Sba117ORF4512P | |
| 4507 | SMF family protein | |||
| 4508 | ATP-dependent DNA helicase, RecQ family | |||
| ??? | S | S.SbaOSORF4349P (45% identity) | S.Sba117ORF4512P | |
| 4510 | transposase ISSba13 protein | |||
| 4511 | Integrase catalytic region | |||
| 4512 | M | M.Phe12003I (96% identity) | M.Sba117ORF4512P | |
| 4513 | DNA binding domain protein, excisionase family | |||
| plasmid pSBAL11702 | ||||
| 4742 | pseudogene | |||
| 4744 | M | M.Spu200ORF3878P (97% identity) | M.Sba117ORF4744P | |
| 4745 | S | S.AseAS80ORF14295P (97% identity) | S.Sba117ORF4744P | |
| 4746 | filamentation induced by cAMP protein Fic | |||
| 4747 | R | Sba223ORF3470P (99% identity) | Sba117ORF4744P | |
| 4748 | Protein of unknown function, RAQPRD | |||
| plasmid pSBAL11703 | ||||
| 4812 | Domain of unknown function DUF1814 | |||
| 4813 | M | M.Sba625ORF4127P (97% identity) | M.Sba117ORF4813P | |
| 4814 | S | S.Emo1412ORF2805P (56% identity) | S.Sba117ORF4813P | |
| 4815 | R | SbaOSORF4458P (99% identity) | Sba117ORF4813P | |
| 4816 | 114 aa hypothetical protein KT99_09264 | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4265 | 61 aa hypothetical protein | |||
| 4266 | M | M.SbaOSORF4110P (100% identity) | GATC | M.Sba117ORF4266P |
| 4267 | Sporulation domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1689 | Integrase catalytic region | |||
| 1690 | M | M.SbaOSORF1580P (100% identity) | M.Sba117ORF1690P | |
| 1691 | mobile mystery protein B | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 777 | pseudogene | |||
| 778 | R | SbaOSMrrP (99% identity) | Sba117MrrP | |
| 779 | 81 aa hypothetical protein | |||