Haloquadratum walsbyi C23 DSM 16854 |
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Putative Haloquadratum walsbyi C23 DSM 16854 RM systems
Ref: Dyall-Smith,M. et al. PLoS One (2011) In press
REBASE ref # 12897
| Sequence length: | GenBank #: | |
| Chromosome: | 3,148,033 bp | FR746099 |
| plasmid PL100: | 100,258 bp | FR746100 |
REBASE acronym: HwaC23
Org_num: 7161
All begin Hqrw_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2617 | DUF45 family protein | |||
| 2618 | R | HwaC23ORF5066P (85% identity) | HwaC23ORF2621P | |
| 2619 | S | S.HspYCN54ORF17710P (32% identity) | S1.HwaC23ORF2621P | |
| 2620 | S | S.MspAMETS1ORF6465P (42% identity) | S2.HwaC23ORF2621P | |
| 2621 | M | M.HwaC23ORF5066P (93% identity) | M.HwaC23ORF2621P | |
| 2622 | XerC/D-like integrase | |||
| plasmid PL100 | ||||
| 5065 | TATA-box binding protein , component of TFIID and TFIIIB | |||
| 5066 | M | M.HwaC23ORF2621P (93% identity) | M.HwaC23ORF5066P | |
| 5067 | S | S.Hka19301I (43% identity) | S1.HwaC23ORF5066P | |
| 5068 | N-6 DNA methylase | |||
| 5069 | S | S.HspC46ORF14230P (46% identity) | S2.HwaC23ORF5066P | |
| 5070 | R | HwaC23ORF2621P (85% identity) | HwaC23ORF5066P | |
| 5071 | DUF45 family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1383 | Uncharacterized protein | |||
| 1384 | M | M.SspC3ORFEP (9% identity) | M.HwaC23ORF1384P | |
| 1385 | homolog to type I restriction-modification | |||
| 2136 | ABC-type transport system ATP-binding/permease | |||
| 2138 | M | M.HwaORF1970P (99% identity) | GGCC | M.HwaC23ORF2138P |
| 2139 | R | HwaORF1970P (97% identity) | GGCC | HwaC23ORF2138P |
| 2140 | aldehyde dehydrogenase | |||
| 2257 | uncharacterized protein | |||
| 2258 | M | M.UhaSSORFAP (92% identity) | M.HwaC23ORF2258P | |
| 2259 | probable DEAD/DEAH box helicase | |||
| plasmid PL100 | ||||
| 5085 | ATP-dependent helicase | |||
| 5086 | RM | NphDORF3874P (64% identity) | HwaC23ORF5086P | |
| 5087 | pseudogene | |||