Chlorobium phaeobacteroides DSM 266 |
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Putative Chlorobium phaeobacteroides DSM 266 RM systems
Ref: Copeland,A. et al. unpublished
REBASE ref # 9827
Complete sequence: 3,133,902 bp
GenBank #: CP000492 (NC_008639)
REBASE acronym: Cph266
Org_num: 4401
All begin Cpha266_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1127 | 439 aa conserved hypothetical protein | |||
| 1128 | R | PphBUORF1454P (97% identity) | Cph266ORF1130P | |
| 1129 | transcriptional regulator | |||
| 1130 | M | M.PphBUORF1454P (96% identity) | M.Cph266ORF1130P | |
| 1131 | S | S.Nsp1103ORF715P (49% identity) | S.Cph266ORF1130P | |
| 1132 | 324 aa hypothetical protein | |||
| 1397 | 177 aa hypothetical protein | |||
| 1398 | S | S2.AfaJ481ORF14425P (52% identity) | S.Cph266ORF1397P | |
| 1399 | transcriptional regulator | |||
| 1490 | protein of unknown function DUF323 | |||
| 1491 | M | M.MsiT4MORF1584P (77% identity) | M.Cph266ORF1491P | |
| 1492 | S | S.Mmazm15ORF16065P (52% identity) | S.Cph266ORF1491P | |
| 1493 | phage Gp37Gp68 family protein | |||
| 1494 | 370 aa hypothetical protein | |||
| 1495 | R | Mho15978ORF317P (72% identity) | Cph266ORF1491P | |
| 1496 | 184 aa hypothetical protein | |||
| 1704 | 264 aa hypothetical protein | |||
| 1705 | R | Cli245ORF2469P (93% identity) | Cph266ORF1712P | |
| 1706 | transcriptional regulator | |||
| 1707 | 298 aa conserved hypothetical protein | |||
| 1708 | 1081 aa hypothetical protein | |||
| 1709 | zinc finger, CHC2-family protein | |||
| 1710 | S | S.AfeSS3ORF301P (46% identity) | S.Cph266ORF1712P | |
| 1711 | DNA-damage-inducible protein D | |||
| ??? | M | M.AfeSS3ORF301P (60% identity) | M.Cph266ORF1712P | |
| 1713 | 261 aa conserved hypothetical cytosolic protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 72 | 126 aa hypothetical protein | |||
| 73 | M | M.Cli245ORF54P (90% identity) | CTAG | M.Cph266ORF73P |
| 74 | 90 aa hypothetical protein | |||
| 79 | histidine kinase | |||
| 80 | M | DNA-cytosine methyltransferase | M.Cph266ORF80P | |
| 81 | 433 aa conserved hypothetical protein | |||
| 80 | DNA-cytosine methyltransferase | |||
| ??? | R | GspEPRMORF6155P (62% identity) | CCWGG | Cph266ORF83P |
| 82 | V | V.SspLY54ORF4365P (56% identity) | V.Cph266ORF83P | |
| 83 | M | M.EspS17ORF2073P (55% identity) | CCWGG | M.Cph266ORF83P |
| 84 | 481 aa conserved hypothetical protein | |||
| 634 | transcriptional regulator | |||
| 635 | M | M.Rba113ORF8518P (68% identity) | M.Cph266ORF635P | |
| 636 | 941 aa conserved hypothetical protein | |||
| 1299 | protein of unknown function DUF323 | |||
| 1300 | RM | CphBORF884P (85% identity) | Cph266ORF1300P | |
| 1301 | helicase domain protein | |||
| 1500 | 60 aa conserved hypothetical protein | |||
| 1501 | M | M.CphKB01ORFJP (72% identity) | GTCGAC | M.Cph266ORF1501P |
| 1502 | R | Tsp3ORF1448P (65% identity) | GTCGAC | Cph266ORF1501P |
| 1503 | 112 aa hypothetical protein | |||
| 1516 | 353 aa conserved hypothetical protein | |||
| 1517 | R | Cli245ORF789P (79% identity) | CAGCTG | Cph266ORF1518P |
| ??? | M | M.Cli245ORF789P (79% identity) | CAGCTG | M.Cph266ORF1518P |
| 1519 | AMP-dependent synthetase and ligase | |||
| 1602 | helicase domain protein | |||
| 1603 | RM | GsuAM1ORF9660P (35% identity) | Cph266ORF1603P | |
| 1604 | 374 aa conserved hypothetical protein | |||
| 1907 | imidazole glycerol phosphate synthase subunit | |||
| 1908 | R | CviCB13ORF770P (66% identity) | CTCGAG | Cph266ORF1909P |
| 1909 | M | M.PaeR7I (74% identity) | CTCGAG | M.Cph266ORF1909P |
| 1910 | NADH:ubiquinone oxidoreductase complex I | |||
| 1913 | 334 aa conserved hypothetical protein | |||
| 1914 | R | DspN47ORF16120P (16% identity) | Cph266ORF1915P | |
| ??? | M | CphBORF874P (41% identity) | M.Cph266ORF1915P | |
| 1916 | adenosine deaminase | |||
| 2136 | Metal-dependent hydrolases of the beta-lactamase | |||
| 2137 | M | M.Msp14BORFDP (75% identity) | RGATCY | M.Cph266ORF2137P |
| 2138 | 100 aa conserved hypothetical protein | |||
| 2522 | 326 aa hypothetical protein | |||
| 2523 | R | Cli245ORF646P (92% identity) | CCCGGG | Cph266ORF2524P |
| 2524 | M | M.Cfe13031ORF340P (92% identity) | CCCGGG | M.Cph266ORF2524P |
| 2525 | 152 aa conserved hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 934 | R | PspHL130ORF10575P (77% identity) | Cph266ORF939P | |
| 935 | 154 aa hypothetical protein | |||
| 936 | transposase, IS204/IS1001/IS1096/IS1165 family | |||
| 937 | 63 aa hypothetical protein | |||
| 938 | helix-turn-helix domain protein | |||
| 939 | M | M.PspHL130ORF10575P (72% identity) | M.Cph266ORF939P | |
| 940 | permease YjgP/YjgQ family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1614 | restriction endonuclease | |||
| 1615 | R | DspN47MrrP (62% identity) | Cph266MrrP | |
| 1616 | 108 aa hypothetical protein | |||