Thioalkalimicrobium cyclicum ALM1 |
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Putative Thioalkalimicrobium cyclicum ALM1 RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 22097
Complete sequence: 1,932,455 bp
GenBank #: CP002776 (NC_015581)
REBASE acronym: TcyALM1
Org_num: 7136
All begin Thicy_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 534 | Protein of unknown function DUF2081 | |||
| 535 | M | M.HcrSP41ORF2257P (80% identity) | M.TcyALM1ORF535P | |
| 536 | Protein of unknown function DUF2136 | |||
| 537 | transcriptional regulator, XRE family | |||
| 538 | S | S.Mma102421ORF26020P (53% identity) | S.TcyALM1ORF535P | |
| 539 | filamentation induced by cAMP protein Fic | |||
| 540 | 55 aa hypothetical protein | |||
| 541 | R | Ple110ORFCP (69% identity) | TcyALM1ORF535P | |
| 542 | protein of unknown function DUF45 | |||
| 1369 | helix-turn-helix domain protein | |||
| 1370 | R | HpaRR357ORFBP (69% identity) | TcyALM1ORF1374P | |
| 1371 | Abi family protein | |||
| 1372 | 73 aa hypothetical protein | |||
| 1373 | S | S.CloLW9ORF3270P (37% identity) | S.TcyALM1ORF1374P | |
| 1374 | M | M.HpaRR357ORFBP (77% identity) | M.TcyALM1ORF1374P | |
| 1375 | GTP-binding protein YchF | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 848 | 58 aa hypothetical protein | |||
| 849 | M | M.Rle943ORFAP (25% identity) | CCTNNNNNAGG | M.TcyALM1ORF849P |
| 850 | C | C.MaeS298ORF12800P (41% identity) | C.TcyALM1ORF849P | |
| 851 | R | Sga1315ORF24085P (27% identity) | CCTNNNNNAGG | TcyALM1ORF849P |
| 852 | Nickel-transporting ATPase., Fe(3+)-transporting | |||
| 1497 | pseudogene | |||
| 1498 | RM | PfaYLCF04ORFHP (71% identity) | TcyALM1ORF1498P | |
| 1499 | Haloacid dehalogenase domain protein hydrolase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 556 | 486 aa hypothetical protein | |||
| 557 | R | Cco13826McrBP (19% identity) | TcyALM1McrBP | |
| 558 | R | ClaRMcrCP (30% identity) | TcyALM1McrCP | |
| 559 | 267 aa hypothetical protein | |||
| 1483 | Phosphoglycerate mutase | |||
| 1484 | R | TmiBDL05McrBP (78% identity) | TcyALM1McrB2P | |
| 1485 | 88 aa hypothetical protein | |||
| 1486 | Protein of unknown function DUF2442 | |||
| 1487 | R | TaeAL3McrCP (78% identity) | TcyALM1McrC2P | |
| 1488 | 83 aa hypothetical protein | |||