Novosphingobium species PP1Y |
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Putative Novosphingobium species PP1Y RM systems
Ref: D'Argenio,V. et al. unpublished
REBASE ref # 12898
| Sequence length: | GenBank #: | |
| Chromosome: | 3,911,486 bp | FR856862 (NC_015580) |
| plasmid Spl: | 48,714 bp | FR856859 (NC_015582) |
REBASE acronym: NspPP1Y
Org_num: 7162
All begin PP1Y_AT, PP1Y_Spl
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2793 | prevent-host-death protein | |||
| 2797 | M | M.SspMGORF15655P (91% identity) | M.NspPP1YORF2797P | |
| 2815 | S | S.RleVORF98P (41% identity) | S.NspPP1YORF2797P | |
| 2832 | 608 aa conserved hypothetical protein | |||
| 2851 | R | SbaLL03ORF16440P (95% identity) | NspPP1YORF2797P | |
| 2875 | 612 aa conserved hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3542 | 112 aa hypothetical protein | |||
| 3545 | M | M.NspKA1ORF135P (86% identity) | M.NspPP1YORF3545P | |
| 3558 | phage tail fibre protein | |||
| 3701 | bacteriophage gpQ | |||
| 3714 | R | AspBO6ORF6825P (74% identity) | CGATCG | NspPP1YORF3725P |
| 3725 | M | M.AspBO6ORF6825P (76% identity) | CGATCG | M.NspPP1YORF3725P |
| 3742 | V | V.AspBO6ORF6825P (60% identity) | V.NspPP1YORF3725P | |
| 3758 | replication protein A | |||
| 28055 | dihydropteroate synthase | |||
| 28066 | M | M.NpeUS61I (99% identity) | GANTC | M.NspPP1YORF28066P |
| 28074 | 47 aa hypothetical protein | |||
| 36655 | 483 aa conserved hypothetical protein | |||
| 36671 | RM | Elo6997ORF9205P (58% identity) | NspPP1YORF36671P | |
| 36711 | uncharacterized protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid Spl | ||||
| 42 | chromosome partitioning protein, ParB family | |||
| 59 | R | NspMBES04ORFIP (50% identity) | NspPP1YORF110P | |
| ??? | M | M.NspMBES04ORFIP (61% identity) | M.NspPP1YORF110P | |
| 129 | plasmid maintenance system antidote protein | |||