Genome Report of Helicobacter pylori LIM-001

Helicobacter pylori LIM-001

[index] - [schematics] - [save as Word doc]

Putative Helicobacter pylori LIM-001 RM systems

GenBank: CP051541 (1,638,284 bp)

Type	Gene	Name	Predicted Rec Seq	Coordinates

I	S	S.HpyLIM1ORF2160P		446128-447378 c
I	M	M.HpyLIM1ORF2160P		447371-449011 c
I	R	HpyLIM1ORF2160P		449004-449384 c

I	R	HpyLIM1ORF2295P		473233-476007 c

I	S	S.HpyLIM1ORF3950P		839155-840436 c

I	R	HpyLIM1IIP	ACANNNNNNNCTT	890460-893462 c
I	S	S.HpyLIM1II	ACANNNNNNNCTT	893466-894764 c
I	M	M.HpyLIM1II	ACANNNNNNNCTT	894775-896370 c

I	S	S.HpyLIM1XIII	CRAANNNNNNRTAA	1559373-1560509 c
I	M	M.HpyLIM1XIII	CRAANNNNNNRTAA	1560515-1562974 c
I	R	HpyLIM1XIIIP	CRAANNNNNNRTAA	1563044-1566019

II	M	M1.HpyLIM1ORF275P	CCTC	51695-52393 c
II	M	M2.HpyLIM1ORF275P		52390-52720 c

II	R	HpyLIM1VIP	CCTTC	52947-54206 c
II	M	M.HpyLIM1VI	CCTTC	54206-56674 c

II	M	M.HpyLIM1I	GATC	98246-99070

II	M	M.HpyLIM1XII	TCGA	267750-268922 c

II	R	HpyLIM1ORF1295P	CCGG	269641-270330
II	M	M.HpyLIM1ORF1295P	CCGG	270327-271085

II	R	HpyLIM1VIIP	CTNAG	326717-327409 c
II	M	M.HpyLIM1VII	CTNAG	327411-328529 c

II	M	M.HpyLIM1IV	ATTAAT	490163-491800

II	M	M.HpyLIM1III	ACNGT	494469-495398
II	R	HpyLIM1IIIP	ACNGT	495400-496023

II	M	M.HpyLIM1ORF2390P	ACGT	496119-497174
II	R	HpyLIM1ORF2390P	ACGT	497167-497919

II	M	M.HpyLIM1ORF2490P	GTAC	517604-518581

II	RM	HpyLIM1ORF3375P		706552-711395

II	M	M.HpyLIM1V	CCNNGG	731136-732350
II	R	HpyLIM1VP	CCNNGG	732353-733225

II	R	HpyLIM1IXP	GTNNAC	955497-956126
II	M	M.HpyLIM1IX	GTNNAC	956107-957240

II	M	M.HpyLIM1X	TCNNGA	1108801-1109763
II	R	HpyLIM1XP	TCNNGA	1109763-1110311

II	M	M.HpyLIM1ORF5385P	GCGC	1149284-1150222 c

II	M	M.HpyLIM1ORF5850P	CATG	1250467-1251456 c
II	R	HpyLIM1ORF5850P	CATG	1251465-1251987 c

II	R	HpyLIM1VIIIP	GANTC	1381505-1382377 c
II	M	M.HpyLIM1VIII	GANTC	1382377-1383456 c

II	RM	HpyLIM1ORF6590P		1383600-1387190 c

II	M	M1.HpyLIM1ORF7055P	GGATG	1487749-1488756
II	M	M2.HpyLIM1ORF7055P	GGATG	1488760-1489899
II	R	HpyLIM1ORF7055P	GGATG	1489962-1491404

II	M	M1.HpyLIM1ORF7200P	CCATC	1516624-1517421
II	M	M2.HpyLIM1ORF7200P	CCATC	1517418-1518317
II	R	HpyLIM1ORF7200P	CCATC	1518323-1519939

II	RM	HpyLIM1ORF7295P		1538835-1542609 c

II	M	M.HpyLIM1XI	TGCA	1583871-1584767
II	R	HpyLIM1XIP	TGCA	1584760-1585484

III	M	M.HpyLIM1ORF6650P		1397808-1400234
III	R	HpyLIM1ORF6650P		1400244-1403177

III	M	M.HpyLIM1ORF6715P		1414163-1416100 c
III	R	HpyLIM1ORF6715P		1416094-1418537 c

III	R	HpyLIM1ORF7305P		1542726-1545635 c
III	M	M.HpyLIM1ORF7305P		1545638-1547598 c

Tech Support Feedback NEB Overview Site Map Trademarks Legal and Disclaimers Privacy Cookie Policy Terms of Use