Genome Report of Helicobacter pylori LIM-003

Helicobacter pylori LIM-003

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Putative Helicobacter pylori LIM-003 RM systems

GenBank: CP051539 (1,639,295 bp)

Type	Gene	Name	Predicted Rec Seq	Coordinates

I	S	S.HpyLIM3ORF2160P		444909-446018 c
I	M	M.HpyLIM3ORF2160P		446008-447639 c
I	R	HpyLIM3ORF2160P		447632-450347 c

I	M	M.HpyLIM3ORF2880P	CTANNNNNNNNTGT	602238-603845
I	R	HpyLIM3ORF2880P	CTANNNNNNNNTGT	605135-608131

I	S	S.HpyLIM3XVI	CCANNNNNNNNTGT	603838-605133

I	S	S.HpyLIM3ORF3175P	CTANNNNNNNNTTC	658040-659338

I	S	S.HpyLIM3ORF7375P		1561863-1562963 c
I	M	M.HpyLIM3ORF7375P		1563815-1566277 c
I	R	HpyLIM3ORF7375P		1566348-1569311

II	M	M.HpyLIM3IV	CCTC	48590-49288 c
II	R	HpyLIM3IVP	CCTC	49288-49989 c

II	M	M.HpyLIM3VII	GATC	94718-95539

II	M	M.HpyLIM3X	TCGA	265307-266479 c

II	R	HpyLIM3XIIIP	CCGG	267273-267956
II	M	M.HpyLIM3XIII	CCGG	267953-268711

II	R	HpyLIM3VP	CTNAG	324078-324770 c
II	M	M.HpyLIM3V	CTNAG	324772-325890 c

II	M	M.HpyLIM3ORF2245P	ATTAAT	464593-466230

II	M	M.HpyLIM3ORF2260P	ACNGT	468898-469826
II	R	HpyLIM3ORF2260P	ACNGT	469829-470452

II	M	M.HpyLIM3ORF2270P		470544-471026

II	M	M.HpyLIM3VIII	GTAC	492497-493489
II	R	HpyLIM3VIIIP	GTAC	493476-494231

II	R	HpyLIM3IIIP	CCNNGG	766965-767837 c
II	M	M.HpyLIM3III	CCNNGG	767840-769054 c

II	RM	HpyLIM3ORF3785P		790334-795157 c

II	R	HpyLIM3IXP	GTNNAC	957504-958121
II	M	M.HpyLIM3IX	GTNNAC	958120-959253

II	M	M.HpyLIM3XI	TCNNGA	1110351-1111313
II	R	HpyLIM3XIP	TCNNGA	1111313-1111862

II	M	M.HpyLIM3ORF5380P	GCGC	1152696-1153634 c

II	M	M.HpyLIM3I	CATG	1253389-1254378 c

II	R	HpyLIM3ORF6550P	GANTC	1378742-1379614 c
II	M	M.HpyLIM3ORF6550P	GANTC	1379614-1380694 c

II	RM	HpyLIM3ORF6555P		1380814-1384460 c

II	R	HpyLIM3VIP	GAAGA	1395108-1396335 c
II	M	M1.HpyLIM3VI	GAAGA	1396311-1397012 c
II	M	M2.HpyLIM3VI	GAAGA	1397005-1397868 c

II	S	S.HpyLIM3ORF7055P		1490774-1492007 c
II	RM	HpyLIM3ORF7055P		1492004-1494040 c

II	M	M1.HpyLIM3II	CCATC	1519596-1520393
II	M	M2.HpyLIM3II	CCATC	1520390-1521289
II	R	HpyLIM3IIP	CCATC	1521295-1522911

II	RM	HpyLIM3ORF7295P		1542076-1545879 c

II	M	M.HpyLIM3XII	TGCA	1587270-1588166
II	R	HpyLIM3XIIP	TGCA	1588159-1588890

III	M	M.HpyLIM3XIV	GGCAA	1398115-1400379
III	R	HpyLIM3XIVP	GGCAA	1400389-1403316

III	M	M.HpyLIM3ORF6695P		1414098-1415993 c
III	R	HpyLIM3ORF6695P		1415987-1418512 c

III	R	HpyLIM3ORF7305P		1545986-1548901 c
III	M	M.HpyLIM3ORF7305P		1548904-1550836 c

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