Genome Report of Helicobacter pylori LIM-005

Helicobacter pylori LIM-005

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Putative Helicobacter pylori LIM-005 RM systems

GenBank: CP051537 (1,619,464 bp)

Type	Gene	Name	Predicted Rec Seq	Coordinates

I	S	S.HpyLIM5ORF2160P	CACNNNNNTTA	447400-448659 c
I	M	M.HpyLIM5ORF2160P	CACNNNNNTTA	448652-450283 c
I	R	HpyLIM5ORF2160P	CACNNNNNTTA	450276-453493 c

I	S	S.HpyLIM5ORF3635P		780412-781715 c

I	R	HpyLIM5ORF3940P	ACANNNNNNNTGG	832654-835653 c
I	S	S.HpyLIM5ORF3940P	ACANNNNNNNTGG	835763-837045 c
I	M	M.HpyLIM5ORF3940P	ACANNNNNNNTGG	837056-838654 c

I	S	S.HpyLIM5XIV	CCANNNNNNNTTTA	1539778-1540977 c
I	M	M.HpyLIM5XIV	CCANNNNNNNTTTA	1540986-1543436 c
I	R	HpyLIM5XIVP	CCANNNNNNNTTTA	1543506-1546481

II	M	M1.HpyLIM5IV	CCTC	49049-49747 c
II	M	M2.HpyLIM5IVP	CCTC	49725-50315 c

II	M	M.HpyLIM5ORF265P	GTSAC	50646-51678 c
II	R	HpyLIM5ORF265P	GTSAC	51688-52454 c

II	M	M.HpyLIM5VII	GATC	94877-95701

II	M	M.HpyLIM5X	TCGA	264478-265650 c

II	R	HpyLIM5XIIIP	CCGG	265970-266665
II	M	M.HpyLIM5XIII	CCGG	266662-267420

II	R	HpyLIM5VP	CTNAG	322782-323474 c
II	M	M.HpyLIM5V	CTNAG	323476-324594 c

II	M	M.HpyLIM5II	ATTAAT	467713-469350

II	M	M.HpyLIM5XII	ACNGT	472030-472959
II	R	HpyLIM5XIIP	ACNGT	472962-473597

II	M	M.HpyLIM5ORF2265P	ACGT	473674-474728
II	R	HpyLIM5ORF2265P	ACGT	474721-475477

II	M	M.HpyLIM5VIII	GTAC	498021-499013
II	R	HpyLIM5VIIIP	GTAC	499000-499755

II	RM	HpyLIM5ORF3035P		644507-649294

II	M	M.HpyLIM5ORF3135P	CCNNGG	672378-673590
II	R	HpyLIM5ORF3135P	CCNNGG	673593-674462

II	R	HpyLIM5ORF3335P		720077-721543 c
II	M	M1.HpyLIM5ORF3335P		721540-722580 c
II	M	M2.HpyLIM5ORF3335P		722577-723650 c

II	R	HpyLIM5IXP	GTNNAC	894856-895443
II	M	M.HpyLIM5IX	GTNNAC	895465-896598

II	M	M.HpyLIM5ORF5025P	TCNNGA	1087242-1088206
II	R	HpyLIM5ORF5025P	TCNNGA	1088206-1088755

II	M	M.HpyLIM5ORF5215P	GCGC	1128133-1129071 c

II	M	M.HpyLIM5I	CATG	1225810-1226799 c
II	R	HpyLIM5IP	CATG	1226808-1227326 c

II	R	HpyLIM5VIP	GANTC	1351350-1352216 c
II	M	M.HpyLIM5VI	GANTC	1352216-1353295 c

II	RM	HpyLIM5ORF6395P		1353424-1356930 c

II	R	HpyLIM5ORF6635P		1414212-1414826 c

II	M	M.HpyLIM5ORF6640P		1414807-1415781 c

II	S	S2.HpyLIM5ORF6920P		1469474-1470049 c
II	S	S1.HpyLIM5ORF6920P		1470046-1470702 c
II	RM	HpyLIM5ORF6920P		1470699-1472735 c

II	M	M1.HpyLIM5III	CCATC	1497978-1498775
II	M	M2.HpyLIM5III	CCATC	1498772-1499671
II	R	HpyLIM5IIIP	CCATC	1499677-1501294

II	RM	HpyLIM5ORF7145P		1519187-1523032 c

II	S	S.HpyLIM5ORF7225P		1539778-1540977 c
II	M	M.HpyLIM5ORF7225P		1540986-1543436 c
II	R	HpyLIM5ORF7225P		1543506-1546481

II	M	M.HpyLIM5XI	TGCA	1562971-1563867
II	R	HpyLIM5XIP	TGCA	1563860-1564590

III	M	M.HpyLIM5ORF6455P		1367554-1370184
III	R	HpyLIM5ORF6455P		1370194-1373035

III	M	M.HpyLIM5ORF6515P		1383912-1385828 c
III	R	HpyLIM5ORF6515P		1385831-1388281 c

III	R	HpyLIM5ORF7155P		1523248-1526157 c
III	M	M.HpyLIM5ORF7155P		1526160-1528117 c

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