Genome Report of Helicobacter pylori LIM-008

Helicobacter pylori LIM-008

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Putative Helicobacter pylori LIM-008 RM systems

GenBank: CP051535 (1,667,949 bp)

Type	Gene	Name	Predicted Rec Seq	Coordinates

I	S	S.HpyLIM8ORF2120P	CACNNNNNTTA	439034-440293 c
I	M	M.HpyLIM8ORF2120P	CACNNNNNTTA	440286-441914 c
I	R	HpyLIM8ORF2120P	CACNNNNNTTA	441907-445018 c

I	S	S.HpyLIM8X	CRTANNNNNNNTG	820224-821363 c

I	S	S.HpyLIM8XI	TCTANNNNNNRTAA	1589934-1591070 c
I	M	M.HpyLIM8XI	TCTANNNNNNRTAA	1591079-1593544 c
I	R	HpyLIM8XIP	TCTANNNNNNRTAA	1593614-1596590

II	M	M1.HpyLIM8III	CCTC	48556-49254 c
II	M	M2.HpyLIM8IIIP	CCTC	49232-50317 c
II	R	HpyLIM8IIIP	CCTC	50492-51493 c

II	M	M.HpyLIM8V	GATC	93986-94810

II	M	M.HpyLIM8IX	TCGA	261371-262543 c

II	R	HpyLIM8ORF1275P	CCGG	263338-264021
II	M	M.HpyLIM8ORF1275P	CCGG	264018-264776

II	M	M.HpyLIM8ORF2195P	ATTAAT	459209-460846

II	M	M.HpyLIM8ORF2210P	ACGT	463511-464566
II	R	HpyLIM8ORF2210P	ACGT	464559-465311

II	M	M.HpyLIM8VI	GTAC	535016-536008
II	R	HpyLIM8VIP	GTAC	536014-536751

II	RM	HpyLIM8ORF3195P		689030-693872

II	M	M.HpyLIM8II	CCNNGG	715452-716666
II	R	HpyLIM8IIP	CCNNGG	716669-717542

II	R	HpyLIM8VIIP	GTNNAC	929749-930336
II	M	M.HpyLIM8VII	GTNNAC	930358-931491

II	M	M.HpyLIM8ORF5055P	TCNNGA	1087765-1088726
II	R	HpyLIM8ORF5055P	TCNNGA	1088726-1089275

II	M	M.HpyLIM8ORF5245P	GCGC	1126863-1127801 c

II	M	M.HpyLIM8I	CATG	1225086-1226075 c
II	R	HpyLIM8IP	CATG	1226084-1226602 c

II	R	HpyLIM8IVP	GANTC	1367222-1368094 c
II	M	M.HpyLIM8IV	GANTC	1368094-1369173 c

II	RM	HpyLIM8ORF6525P		1369317-1372824 c

II	RM	HpyLIM8ORF7195P		1514385-1518134

II	R	HpyLIM8ORF7290P		1539214-1540275 c

II	M	M.HpyLIM8ORF7295P		1540315-1542426 c

II	M	M.HpyLIM8VIII	TGCA	1614563-1615459
II	R	HpyLIM8VIIIP	TGCA	1615452-1616183

III	R	HpyLIM8ORF2825P		594332-597355
III	M	M.HpyLIM8ORF2825P		597394-599217

III	M	M.HpyLIM8ORF6585P		1383440-1385912
III	R	HpyLIM8ORF6585P		1385923-1388820

III	M	M.HpyLIM8ORF6650P		1399545-1401257 c
III	R	HpyLIM8ORF6650P		1403111-1405678 c

III	M	M.HpyLIM8ORF7180P	GWCAY	1509318-1511248
III	R	HpyLIM8ORF7180P	GWCAY	1511251-1514169

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