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Putative Escherichia coli RM systems

Sequence name: chromosome 1

GenBank: LR025099 (5,323,688 bp)

 

Type Gene Name Predicted
Rec Seq		 Contig Coordinates
 
II M M.Eco12536DndEP 655147-655524 c
 
II M M.Eco12536DndDP 655521-657494 c
 
II M M.Eco12536DndCP 657496-659151 c
 
II M M.Eco12536ORF2210P 2328712-2330682
 
II M M.Eco12536ORF2453P 2574547-2575188
 
II V V.Eco12536DcmP 3544204-3544860 c
II M M.Eco12536DcmP CCWGG 3544679-3546112 c
 
II M M.Eco12536DamP GATC 4932050-4932877 c

 

Sequence name: chromosome 1

GenBank: LS992192 (5,302,459 bp)

 

Type Gene Name Predicted
Rec Seq		 Contig Coordinates
 
I R EcoTO217ORF4037P AAAGNNNNGTT 3996536-3999634
I M M.EcoTO217ORF4037P AAAGNNNNGTT 3999628-4001265
I S S.EcoTO217ORF4037P AAAGNNNNGTT 4001255-4002502
 
I M M.EcoTO217ORF4403P RTACNNNNGTG 4374923-4376542
I S S.EcoTO217ORF4403P RTACNNNNGTG 4376532-4377836
I R EcoTO217ORF4403P RTACNNNNGTG 4377931-4381194
 
II M M.EcoTO217DamP GATC 372490-373326
 
II M M.EcoTO217ORF468P ATGCAT 470391-471275 c
 
II M M.EcoTO217ORF1232P GATC 1247082-1247735
 
II M M.EcoTO217ORF1241P 1252710-1253762
 
II M M.EcoTO217ORF1271P 1279878-1281311
II R EcoTO217ORF1271P 1281346-1282554 c
 
II M M.EcoTO217DcmP CCWGG 2134221-2135639
II V V.EcoTO217DcmP 2135620-2136090
 
II M M.EcoTO217ORF2282P 2269753-2270793
II R EcoTO217ORF2282P 2270762-2271451 c
 
II M M.EcoTO217ORF2877P A 2859476-2860525 c
 
II M M.EcoTO217ORF3328P 3281842-3282606 c
 
II R EcoTO217ORF4471P GGTCTC 4446902-4448641
II M M1.EcoTO217ORF4471P GGTCTC 4448654-4449844 c
II M M2.EcoTO217ORF4471P GGTCTC 4449837-4451477 c
 
II M M.EcoTO217ORF4740P 4711821-4712867 c
 
IV R EcoTO217McrBP 4443438-4445513
IV R EcoTO217McrCP 4444665-4446792

 

Sequence name: chromosome 1

GenBank: LS992180 (5,137,826 bp)

 

Type Gene Name Predicted
Rec Seq		 Contig Coordinates
 
I R EcoTO124ORF3919P AAAGNNNNGTT 3949764-3952862
I M M.EcoTO124ORF3919P AAAGNNNNGTT 3952856-3954493
I S S.EcoTO124ORF3919P AAAGNNNNGTT 3954483-3955730
 
I M M.EcoTO124ORF4285P RTACNNNNGTG 4328821-4330440
I S S.EcoTO124ORF4285P RTACNNNNGTG 4330430-4331734
I R EcoTO124ORF4285P RTACNNNNGTG 4331829-4335092
 
II RM EcoTO124ORF95P CANCATC 91726-95331 c
 
II M M.EcoTO124DamP GATC 436740-437576
 
II M M.EcoTO124ORF526P ATGCAT 534641-535525 c
 
II M M.EcoTO124DcmP CCWGG 2118069-2119487
II V V.EcoTO124DcmP 2119468-2119938
 
II M M.EcoTO124ORF2738P A 2792674-2793723 c
 
II M M.EcoTO124ORF3190P 3215208-3215972 c
 
II R EcoTO124ORF4356P GGTCTC 4402053-4403792
II M M1.EcoTO124ORF4356P GGTCTC 4403805-4404995 c
II M M2.EcoTO124ORF4356P GGTCTC 4404988-4406628 c
 
IV R EcoTO124McrBP 4398589-4400664
IV R EcoTO124McrCP 4399816-4401943

 

Sequence name: chromosome 1

GenBank: LS992190 (5,124,666 bp)

 

Type Gene Name Predicted
Rec Seq		 Contig Coordinates
 
I R EcoTO148ORF3912P AAAGNNNNGTT 3939297-3942395
I M M.EcoTO148ORF3912P AAAGNNNNGTT 3942389-3944026
I S S.EcoTO148ORF3912P AAAGNNNNGTT 3944016-3945263
 
I M M.EcoTO148ORF4276P RTACNNNNGTG 4316918-4318537
I S S.EcoTO148ORF4276P RTACNNNNGTG 4318527-4319831
I R EcoTO148ORF4276P RTACNNNNGTG 4319926-4323189
 
II RM EcoTO148ORF101P CANCATC 96831-100436 c
 
II M M.EcoTO148DamP GATC 441845-442681
 
II M M.EcoTO148ORF532P ATGCAT 539746-540630 c
 
II M M.EcoTO148DcmP CCWGG 2123280-2124698
II V V.EcoTO148DcmP 2124679-2125149
 
II M M.EcoTO148Dcm2P CCWGG 2134396-2135814
II V V.EcoTO148Dcm2P 2135795-2136265
 
II M M.EcoTO148ORF2762P A 2809002-2810051 c
 
II M M.EcoTO148ORF3214P 3231369-3232133 c
 
II R EcoTO148ORF4344P GGTCTC 4388897-4390636
II M M1.EcoTO148ORF4344P GGTCTC 4390649-4391839 c
II M M2.EcoTO148ORF4344P GGTCTC 4391832-4393472 c
 
IV R EcoTO148McrBP 4385433-4387508
IV R EcoTO148McrCP 4386660-4388787

 

Sequence name: chromosome 1

GenBank: LR025101 (5,059,899 bp)

 

Type Gene Name Predicted
Rec Seq		 Contig Coordinates
 
II RM EcoC1639ORF677P 702606-707531
 
II M M.EcoC1639DndBP 1108345-1109430
 
II M M.EcoC1639DndCP 1109427-1111061
 
II M M.EcoC1639DndDP 1111051-1113051
 
II M M.EcoC1639DndEP 1113051-1113404
 
II R EcoC1639DptHP 1115149-1120209 c
 
II R EcoC1639DptGP 1120190-1121515 c
 
II R EcoC1639DptFP 1121520-1123169 c
 
II M M.EcoC1639ORF2109P 2214617-2215111
 
II M M.EcoC1639ORF2127P A 2222942-2223991
 
II V V.EcoC1639DcmP 2973365-2973835 c
II M M.EcoC1639DcmP CCWGG 2973816-2975234 c
 
II M M.EcoC1639ORF4399P ATGCAT 4565881-4566738
 
II M M.EcoC1639DamP GATC 4653875-4654711 c

 

Sequence name: chromosome 1

GenBank: LS992168 (5,031,440 bp)

 

Type Gene Name Predicted
Rec Seq		 Contig Coordinates
 
I R EcoTO60ORF3804P AAAGNNNNGTT 3844835-3847933
I M M.EcoTO60ORF3804P AAAGNNNNGTT 3847927-3849564
I S S.EcoTO60ORF3804P AAAGNNNNGTT 3849554-3850801
 
I M M.EcoTO60ORF4168P RTACNNNNGTG 4222456-4224075
I S S.EcoTO60ORF4168P RTACNNNNGTG 4224065-4225369
I R EcoTO60ORF4168P RTACNNNNGTG 4225464-4228727
 
II M M.EcoTO60DamP GATC 371818-372654
 
II M M.EcoTO60ORF468P ATGCAT 469719-470603 c
 
II M M.EcoTO60DcmP CCWGG 2009640-2011058
II V V.EcoTO60DcmP 2011039-2011509
 
II M M.EcoTO60ORF2615P A 2683857-2684906 c
 
II M M.EcoTO60ORF3068P 3107476-3108240 c
 
II R EcoTO60ORF4238P GGTCTC 4295688-4297427
II M M1.EcoTO60ORF4238P GGTCTC 4297440-4298630 c
II M M2.EcoTO60ORF4238P GGTCTC 4298623-4300263 c
 
IV R EcoTO60McrBP 4292224-4294299
IV R EcoTO60McrCP 4293451-4295578

 

Sequence name: chromosome 1

GenBank: LS999560 (5,024,868 bp)

 

Type Gene Name Predicted
Rec Seq		 Contig Coordinates
 
I R EcoTO143ORF3798P AAAGNNNNGTT 3838236-3841334
I M M.EcoTO143ORF3798P AAAGNNNNGTT 3841328-3842965
I S S.EcoTO143ORF3798P AAAGNNNNGTT 3842955-3844202
 
I M M.EcoTO143ORF4162P RTACNNNNGTG 4215857-4217476
I S S.EcoTO143ORF4162P RTACNNNNGTG 4217466-4218770
I R EcoTO143ORF4162P RTACNNNNGTG 4218865-4222128
 
II M M.EcoTO143DamP GATC 371044-371880
 
II M M.EcoTO143ORF467P ATGCAT 469657-470541 c
 
II M M.EcoTO143DcmP CCWGG 2004988-2006406
II V V.EcoTO143DcmP 2006387-2006857
 
II M M.EcoTO143ORF2644P A 2707639-2708688 c
 
II M M.EcoTO143ORF3100P 3130749-3131513 c
 
II R EcoTO143ORF4232P GGTCTC 4289089-4290828
II M M1.EcoTO143ORF4232P GGTCTC 4290841-4292031 c
II M M2.EcoTO143ORF4232P GGTCTC 4292024-4293664 c
 
IV R EcoTO143McrBP 4285625-4287700
IV R EcoTO143McrCP 4286852-4288979

 

Sequence name: chromosome 1

GenBank: LS992185 (4,922,897 bp)

 

Type Gene Name Predicted
Rec Seq		 Contig Coordinates
 
I R Eco3426ORF1926P 1982748-1985864 c
I S S.Eco3426ORF1926P 1985986-1987200 c
I M M.Eco3426ORF1926P 1987197-1988753 c
 
II M M.Eco3426ORF1035P GATC 1050575-1051228
 
II M M.Eco3426ORF1084P GGTACC 1091473-1092681
 
II V V.Eco3426DcmP 2995886-2996356 c
II M M.Eco3426DcmP CCWGG 2996337-2997755 c
 
II M M.Eco3426ORF3650P 3672850-3673512
 
II M M.Eco3426ORF4415P ATGCAT 4452851-4453735
 
II M M.Eco3426DamP GATC 4557342-4558178 c
 
IV R Eco3426GmrSDP 1084345-1086234 c

 

Sequence name: chromosome 1

GenBank: LS992166 (4,850,393 bp)

 

Type Gene Name Predicted
Rec Seq		 Contig Coordinates
 
I R EcoTO6ORF2024P 2028463-2031447
 
I R EcoTO6ORF4125P 4140958-4144470
I M M.EcoTO6ORF4125P 4144547-4146136
I S S.EcoTO6ORF4125P 4146133-4147551
 
II M M.EcoTO6DamP GATC 386919-387755
 
II M M.EcoTO6ORF491P ATGCAT 490306-491190 c
 
II M M.EcoTO6DcmP CCWGG 1979857-1981275
II V V.EcoTO6DcmP 1981256-1981726
 
II M M.EcoTO6ORF3189P GATC 3191879-3192736 c
 
II M M.EcoTO6ORF3546P GATC 3544764-3545417 c
 
IV R EcoTO6MrrP 4139856-4140770 c
 
IV R EcoTO6McrBP 4148263-4149660
IV R EcoTO6McrCP 4149660-4150706

 

Sequence name: chromosome 1

GenBank: LR025096 (4,830,938 bp)

 

Type Gene Name Predicted
Rec Seq		 Contig Coordinates
 
I R Eco7215ORF3061P 2854882-2858166 c
I S S.Eco7215ORF3061P 2858899-2860134 c
I M M.Eco7215ORF3061P 2860124-2861647 c
 
II M M.Eco7215ORF1793P GATC 1607214-1607741
 
II V V.Eco7215DcmP 2903997-2904467 c
II M M.Eco7215DcmP CCWGG 2904448-2905866 c
 
II M M.Eco7215ORF4525P ATGCAT 4354170-4355054
 
II M M.Eco7215DamP GATC 4442309-4443145 c
 
Orphan
M		 M M.Eco7215ORF1925P GATC 1731873-1732730

 

Sequence name: chromosome 1

GenBank: LS992171 (4,757,668 bp)

 

Type Gene Name Predicted
Rec Seq		 Contig Coordinates
 
II M M.EcoTO73DamP GATC 364927-365763
 
II M M.EcoTO73ORF459P ATGCAT 468306-469190 c
 
II M M.EcoTO73DcmP CCWGG 1847565-1848983
II V V.EcoTO73DcmP 1848964-1849434
 
II R EcoTO73ORF4050P GGTCTC 4080728-4082467
II M M1.EcoTO73ORF4050P GGTCTC 4082480-4083670 c
II M M2.EcoTO73ORF4050P GGTCTC 4083663-4085303 c
 
IV R EcoTO73McrBP 4077264-4079339
IV R EcoTO73McrCP 4078491-4080618

 

Sequence name: chromosome 1

GenBank: LS998785 (4,750,815 bp)

 

Type Gene Name Predicted
Rec Seq		 Contig Coordinates
 
I R EcoTO75ORF1188P ACAYNNNNCTG 1180252-1183491 c
I S S.EcoTO75ORF1188P ACAYNNNNCTG 1183550-1184743 c
I M M.EcoTO75ORF1188P ACAYNNNNCTG 1184740-1186287 c
 
II M M.EcoTO75DamP GATC 429963-430799
 
II M M.EcoTO75ORF530P ATGCAT 533328-534212 c
 
II M M.EcoTO75DcmP CCWGG 1958340-1959758
II V V.EcoTO75DcmP 1959739-1960209
 
II M M.EcoTO75ORF4284P GATC 4343343-4343996 c
 
IV R EcoTO75McrCP 2765242-2766363 c
IV R EcoTO75McrBP 2766360-2768315 c

 

Sequence name: plasmid 2

GenBank: LS992169 (172,923 bp)

 

Type Gene Name Predicted
Rec Seq		 Contig Coordinates
 
I R EcoTO60ORF5093P CAAYNNNNNNCTGG 113690-116806 c
I S S.EcoTO60ORF5093P CAAYNNNNNNCTGG 116928-118211 c
I M M.EcoTO60ORF5093P CAAYNNNNNNCTGG 118208-119764 c
 
II M M.EcoTO60ORF5079P SAY 101580-102263 c

 

Sequence name: plasmid 2

GenBank: LS992186 (164,477 bp)

 

Type Gene Name Predicted
Rec Seq		 Contig Coordinates
 
I R Eco3426ORF4926P CAAYNNNNNNCTGG 43927-47043 c
I S S.Eco3426ORF4926P CAAYNNNNNNCTGG 47165-48448 c
I M M.Eco3426ORF4926P CAAYNNNNNNCTGG 48445-50001 c
 
II M M.Eco3426ORF4904P SAY 22386-23069 c

 

Sequence name: plasmid 2

GenBank: LS992181 (149,633 bp)

 

Type Gene Name Predicted
Rec Seq		 Contig Coordinates
 
II M M.EcoTO124ORF5074P 1434-1947 c
 
II M M.EcoTO124ORF5238P 135524-136207 c

 

Sequence name: plasmid 2

GenBank: LS992191 (133,139 bp)

 

Type Gene Name Predicted
Rec Seq		 Contig Coordinates
 
II M M.EcoTO148ORF5162P SAY 91393-92076

 

Sequence name: plasmid 3

GenBank: LS992182 (133,139 bp)

 

Type Gene Name Predicted
Rec Seq		 Contig Coordinates
 
II M M.EcoTO124ORF5356P SAY 91393-92076

 

Sequence name: plasmid 2

GenBank: LS992193 (128,948 bp)

 

Type Gene Name Predicted
Rec Seq		 Contig Coordinates
 
II M M.EcoTO217ORF5424P 90653-91336 c

 

Sequence name: plasmid 2

GenBank: LS998786 (103,198 bp)

 

Type Gene Name Predicted
Rec Seq		 Contig Coordinates
 
II M M.EcoTO75ORF4788P 86410-87093

 

Sequence name: plasmid 3

GenBank: LS999562 (102,557 bp)

 

Type Gene Name Predicted
Rec Seq		 Contig Coordinates
 
II M M.EcoTO143ORF5152P 36472-37155

 

Sequence name: plasmid 3

GenBank: LS992187 (99,072 bp)

 

Type Gene Name Predicted
Rec Seq		 Contig Coordinates
 
II M M.Eco3426ORF5133P 59727-60410

 

Sequence name: plasmid 4

GenBank: LS992188 (96,986 bp)

 

Type Gene Name Predicted
Rec Seq		 Contig Coordinates
 
II M M.Eco3426ORF5248P 49936-50619 c

 

Sequence name: plasmid 3

GenBank: LS992194 (86,367 bp)

 

Type Gene Name Predicted
Rec Seq		 Contig Coordinates
 
II M M.EcoTO217ORF5493P 16746-17429 c

 

Sequence name: plasmid 3

GenBank: LS998787 (27,017 bp)

 

Type Gene Name Predicted
Rec Seq		 Contig Coordinates
 
II M M.EcoTO75ORF4842P CCWGG 18972-20405
II R EcoTO75ORF4842P CCWGG 20439-21647 c

 

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