Genome Report of Helicobacter pylori Rif2

Helicobacter pylori Rif2

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Putative Helicobacter pylori Rif2 RM systems

GenBank: CP003906 (1,667,890 bp)

Type	Gene	Name	Predicted Rec Seq	Coordinates

I	S	S.HpyRif2ORF2375P		480068-481165 c
I	M	M.HpyRif2ORF2375P		481325-482788 c
I	R	HpyRif2ORF2375P		482781-485948 c

I	S	S.HpyRif2ORF4060P	CTANNNNNNNNTGT	845552-846847 c

I	R	HpyRif2ORF4365P	CTANNNNNNNNTGT	896857-899457 c
I	S	S.HpyRif2ORF4365P	CTANNNNNNNNTGT	899856-901139 c
I	M	M.HpyRif2ORF4365P	CTANNNNNNNNTGT	901132-902841 c

I	R	HpyRif2ORF7260P		1464775-1467753 c
I	M	M.HpyRif2ORF7260P		1467823-1470276
I	S	S.HpyRif2ORF7260P		1470273-1470563

II	M	M1.HpyRif2ORF230P	CCTC	49335-50033 c
II	M	M2.HpyRif2ORF230P	CCTC	50030-51097 c
II	R	HpyRif2ORF230P	CCTC	51094-52301 c

II	R	HpyRif2ORF255P	CCTTC	52460-53719 c
II	M	M.HpyRif2ORF255P	CCTTC	53716-56187 c

II	R	HpyRif2ORF450P	GATC	97257-98090
II	M	M.HpyRif2ORF450P	GATC	98084-98917

II	M	M.HpyRif2ORF1315P	TCGA	269383-270537 c

II	R	HpyRif2ORF1330P	CCGG	271086-271688
II	M	M.HpyRif2ORF1330P	CCGG	271800-272558

II	R	HpyRif2ORF1870P	TCNNGA	376780-377277 c
II	M	M.HpyRif2ORF1870P	TCNNGA	377327-378170 c

II	M	M.HpyRif2ORF2450P	ATTAAT	500136-501773

II	M	M.HpyRif2ORFEP	ACNGT	504448-505370
II	R	HpyRif2ORFEP	ACNGT	505379-505891

II	M	M.HpyRif2ORFFP	ACGT	506150-507139
II	R	HpyRif2ORFFP	ACGT	507141-507893

II	M	M.HpyRif2ORFDP	GTAC	530019-531054
II	R	HpyRif2ORFDP	GTAC	531011-531795

II	RM	HpyRif2ORFGP		715100-719871

II	R	HpyRif2ORF4690P	GTNNAC	960903-961508
II	M	M.HpyRif2ORF4690P	GTNNAC	961489-962640

II	M	M.HpyRif2ORF5785P	GCGC	1187021-1187959 c

II	M	M.HpyRif2ORF6260P	CATG	1285210-1286199 c
II	R	HpyRif2ORF6260P	CATG	1286208-1286726 c

II	R	HpyRif2ORF6985P	GANTC	1411366-1412238 c
II	M	M.HpyRif2ORF6985P	GANTC	1412238-1413317 c

II	RM	HpyRif2ORF6990P		1413461-1417063 c

II	R	HpyRif2ORF7065P	GAAGA	1427708-1428979 c
II	M	M1.HpyRif2ORF7065P	GAAGA	1428995-1429777 c
II	M	M2.HpyRif2ORF7065P	GAAGA	1429764-1430627 c

II	S	S.HpyRif2ORF7625P		1543464-1544657 c
II	RM	HpyRif2ORF7625P		1544723-1546762 c

II	RM	HpyRif2ORFAP	GCGTA	1590671-1594799 c

II	M	M.HpyRif2ORF7965P	TGCA	1614871-1615059
II	R	HpyRif2ORF7965P	TGCA	1615052-1615738

III	R	HpyRif2ORF3065P	GCAG	623240-626182
III	M	M.HpyRif2ORF3065P	GCAG	626179-628053

III	M	M.HpyRif2ORF7075P	TCAG	1430876-1433304
III	R	HpyRif2ORF7075P	TCAG	1433315-1436221

III	R	HpyRif2ORFBP		1597218-1600121 c
III	M	M.HpyRif2ORFBP		1600124-1602060 c

IV	R	HpyRif2GmrSDP		539981-541957

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