Escherichia coli 2024CK-00188 |
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Putative Escherichia coli 2024CK-00188 RM systems
Ref: Hergert,J. et al. unpublished
REBASE ref # 35260
| Sequence length: | GenBank #: | |
| Chromosome: | 4,819,033 bp | CP150019 |
| plasmid unnamed1: | 132,479 bp | CP150018 |
| plasmid unnamed2: | 102,458 bp | CP150020 |
| plasmid unnamed3: | 86,345 bp | CP150017 |
REBASE acronym: Eco00188
Org_num: 77218
All begin WLQ80_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21455 | 322 aa hypothetical protein | |||
| 21460 | R | SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | Eco00188ORF21465P |
| 21465 | M | M.SspS13ORF3945P (100% identity) | CCANNNNNNNNNTTGG | M.Eco00188ORF21465P |
| 21470 | S | S.SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | S.Eco00188ORF21465P |
| 21475 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3065 | cell division protein DamX | |||
| 3070 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco00188DamP |
| 3075 | ribulose-phosphate 3-epimerase | |||
| 3620 | DUF2556 family protein | |||
| 3625 | M | M.Ecostr16ORFAP (100% identity) | ATGCAT | M.Eco00188ORF3625P |
| 3630 | DNA-binding transcriptional regulator Fis | |||
| plasmid unnamed1 | ||||
| 1205 | 73 aa hypothetical protein | |||
| 1210 | M | M.Sso8ORF23800P (100% identity) | SAY | M.Eco00188ORF1210P |
| 1215 | 103 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 25160 | SPFH domain-containing protein | |||
| 25175 | M | M.EcoS51ORF25925P (99% identity) | M.Eco00188ORF25175P | |
| 25180 | recombination-associated protein RdgC | |||
| plasmid unnamed3 | ||||
| 105 | 103 aa hypothetical protein | |||
| 110 | M | M.SflC32ORFDP (100% identity) | SAY | M.Eco00188ORF110P |
| 115 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid unnamed2 | ||||
| 24915 | modulator protein | |||
| 24920 | M | M.SenSL0052ORF25975P (100% identity) | AGACC | M.Eco00188ORF24920P |
| 24925 | R | Sen68045ORF16165P (100% identity) | AGACC | Eco00188ORF24920P |
| 24930 | maturation control protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21480 | DUF1524 domain-containing protein | |||
| 21485 | R | SflN101GmrSP (100% identity) | Eco00188GmrSP | |
| 21490 | cytoplasmic protein | |||