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Putative Roseburia intestinalis M50/1 RM systems
Ref: Pajon,A. et al. unpublished
REBASE ref # 12145
Complete sequence: 4,143,550 bp
GenBank #: FP929049
REBASE acronym: Rin50
Org_num: 6653
All begin ROI_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
3040 | Restriction endonuclease S subunits | |||
3050 | M | M1.Smi11169I (74% identity) | M1.Rin50ORF3040P | |
??? | M | M2.EsiVORF5100P (61% identity) | M2.Rin50ORF3040P | |
??? | S | S1.Eba2529ORF5330P (44% identity) | S.Rin50ORF3040P | |
3100 | R | Eca2594ORF21220P (74% identity) | Rin50ORF3040P | |
3110 | CSL zinc finger. | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
2050 | 101 aa hypothetical protein | |||
2060 | M | M.RinL182ORF353P (100% identity) | M.Rin50ORF2060P | |
2070 | Histidine kinase-, DNA gyrase B-, and HSP90-like | |||
5800 | Transposase and inactivated derivatives | |||
??? | RM | PmeBin246ORFDP (100% identity) | Rin50ORF5810P | |
5820 | Uncharacterized conserved protein | |||
11920 | 29 aa hypothetical protein | |||
11930 | R | Bsp5B48ORF12305P (93% identity) | GCSGC | Rin50ORF11980P |
11940 | Z1 domain. | |||
11950 | 88 aa hypothetical protein | |||
11960 | Integrase core domain. | |||
11980 | M | M.Bsp5B48ORF12305P (96% identity) | GCSGC | M.Rin50ORF11980P |
11990 | 74 aa hypothetical protein | |||
11990 | 74 aa hypothetical protein | |||
12000 | V | V.BweFAAORF13120P (79% identity) | V.Rin50ORF12000P | |
12020 | 38 aa hypothetical protein | |||
12410 | 131 aa hypothetical protein | |||
12420 | M | M.Aco30302ORF9360P (100% identity) | GATC | M.Rin50ORF12420P |
12430 | DNA modification methylase | |||
12420 | Transcriptional activator, adenine-specific DNA | |||
12430 | M | M.Aco30302ORF9365P (100% identity) | CTSAG | M.Rin50ORF12430P |
12440 | SpoVG. | |||
??? | DNA methylase N-4/N-6 domain-containing protein | |||
??? | M | M.Ebo30301ORF6230P (42% identity) | M.Rin50ORF2885P | |
28900 | 424 aa hypothetical protein | |||
31920 | 66 aa hypothetical protein | |||
31930 | M | M.PmeBin149ORFDP (99% identity) | CCTTC | M.Rin50ORF31930P |
31940 | R | PmeBin149ORFDP (99% identity) | CCTTC | Rin50ORF31930P |
31960 | Predicted restriction endonuclease | |||
34370 | Uncharacterized vancomycin resistance protein | |||
34380 | M | M.RinL182ORF3923P (99% identity) | CTGCAG | M.Rin50ORF34380P |
34390 | R | RinL182ORF3923P (100% identity) | CTGCAG | Rin50ORF34380P |
34400 | 5/3-nucleotidase SurE | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
28870 | 220 aa hypothetical protein | |||
??? | M | M.Cko11075ORF3899P (50% identity) | M.Rin50ORF2880P | |
??? | site-specific DNA-methyltransferase | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
31940 | 405 aa hypothetical protein | |||
31960 | R | Bth682McrB2P (12% identity) | Rin50McrBP | |
31970 | 109 aa hypothetical protein |