|
Putative Mycoplasmopsis cynos 87299 RM systems
Ref: Framst,I. et al. unpublished
REBASE ref # 38004
Complete sequence: 1,001,741 bp
GenBank #: CP140753
REBASE acronym: Mcy87299
Org_num: 76116
All begin RRG60_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
2140 | 63 aa hypothetical protein | |||
2145 | S | S.Mcy85384ORF2840P (100% identity) | S.Mcy87299ORF2145P | |
2150 | helix-turn-helix domain-containing protein | |||
2655 | 64 aa hypothetical protein | |||
2660 | S | S2.Mcy94662ORF3265P (98% identity) | S2.Mcy87299ORF2665P | |
2665 | M | M.Mcy80950ORF3410P (99% identity) | M.Mcy87299ORF2665P | |
2670 | S | S3.Mcy64228ORF315P (25% identity) | S1.Mcy87299ORF2665P | |
2675 | R | Mcy85201ORF1360P (98% identity) | Mcy87299ORF2665P | |
2680 | site-specific integrase | |||
2685 | S | S1.Mcy30510ORF3070P (32% identity) | S3.Mcy87299ORF2665P | |
2690 | S | S.Mcy993aORF770P (29% identity) | S4.Mcy87299ORF2665P | |
2695 | 923 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
120 | sigma factor-like helix-turn-helix DNA-binding | |||
125 | R | MgaIPTORF330P (42% identity) | Mcy87299ORF130P | |
130 | M | M.McaUFG1ORF638P (93% identity) | M.Mcy87299ORF130P | |
135 | 90 aa hypothetical protein | |||
520 | hypoxanthine phosphoribosyltransferase | |||
525 | M | M.Mcy94662ORF910P (100% identity) | M.Mcy87299ORF525P | |
530 | R | Mcy98999ORF1560P (99% identity) | Mcy87299ORF525P | |
535 | amino acid permease | |||
1080 | tyrosine-type recombinase/integrase | |||
1085 | M | M.Mcy98999ORF2340P (99% identity) | M.Mcy87299ORF1085P | |
1090 | DUF262 domain-containing protein | |||
1935 | 224 aa hypothetical protein | |||
1940 | M | M.Mcy97732ORF3000P (99% identity) | M.Mcy87299ORF1940P | |
1945 | 395 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
3795 | FAD-dependent oxidoreductase | |||
3800 | R | Mcy98999ORF780P (100% identity) | Mcy87299ORF3805P | |
3805 | M | M.Mcy98999ORF780BP (78% identity) | M.Mcy87299ORF3805P | |
3810 | KilA-N domain-containing protein | |||
3825 | IS30 family transposase | |||
3830 | R | Mcy85384ORF3910P (99% identity) | Mcy87299ORF3835P | |
??? | M | M.Mcy85384ORF3850P (98% identity) | M.Mcy87299ORF3835P | |
3845 | lysine--tRNA ligase | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
2185 | IS3 family transposase | |||
2190 | R | McyMcrCP (99% identity) | Mcy87299McrCP | |
2195 | 98 aa hypothetical protein | |||
2200 | IS3 family transposase | |||
2205 | R | McyMcrBP (83% identity) | Mcy87299McrBP | |
2210 | 56 aa hypothetical protein |