Escherichia coli LR-28 |
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Putative Escherichia coli LR-28 RM systems
Ref: Hoang,H.T.T. et al. unpublished
REBASE ref # 37785
Complete sequence: 4,813,986 bp
GenBank #: AP027512
REBASE acronym: EcoLR28
Org_num: 72628
Last updated: 05/12/2025 05:08
All begin VEE31_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 10100 | 197 aa hypothetical protein | |||
| 10110 | R | Cfr985ORF5125P (100% identity) | EcoLR28ORF10130P | |
| 10120 | S | S.Cfr985ORF5125P (100% identity) | S.EcoLR28ORF10130P | |
| 10130 | M | M.Cfr985ORF5125P (100% identity) | M.EcoLR28ORF10130P | |
| 10140 | 64 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3550 | cell division protein DamX | |||
| ??? | M | M.SspPIBDamP (100% identity) | GATC | M.EcoLR28DamP |
| 3570 | ribulose-phosphate 3-epimerase | |||
| 4540 | acrEF/envCD operon transcriptional regulator | |||
| 4550 | M | M.EspP079ORF3959P (100% identity) | ATGCAT | M.EcoLR28ORF4550P |
| 4560 | DNA-binding protein Fis | |||
| 17900 | phosphohydrolase | |||
| 17910 | M | M.EcoC130DcmP (100% identity) | CCWGG | M.EcoLR28DcmP |
| 17920 | V | V.EcoUTAK1DcmP (99% identity) | V.EcoLR28DcmP | |
| 17930 | amino acid exporter for phenylalanine, | |||
| 24690 | DUF1317 domain-containing protein | |||
| 24700 | M | M.Eho121ORF5490P (97% identity) | M.EcoLR28ORF24700P | |
| 24710 | 72 aa hypothetical protein | |||
| 37550 | RM | EcoZ30ORF19095P (100% identity) | EcoLR28ORF37550P | |
| 37560 | ATP-dependent helicase | |||
| 37630 | 216 aa hypothetical protein | |||
| 37640 | R | Ecoi362ORF3874P (99% identity) | EcoLR28ORF37640P | |
| 37650 | 59 aa hypothetical protein | |||
| 37650 | 59 aa hypothetical protein | |||
| ??? | M | M.Ecom138ORFHP (100% identity) | RCCGGY | M.EcoLR28ORF37660P |
| 37670 | R | Ecom138ORFHP (99% identity) | RCCGGY | EcoLR28ORF37660P |
| 37680 | 78 aa hypothetical protein | |||
| 39140 | DNA repair protein | |||
| 39150 | RM | M.EfeV (100% identity) | GCTAAT | EcoLR28ORF39150P |
| 39160 | 587 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 36970 | membrane protein | |||
| 36980 | R | EcosEC10MrrP (99% identity) | EcoLR28MrrP | |
| 36990 | 58 aa hypothetical protein | |||