Vibrio ruber HNIBRBA4764 |
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Putative Vibrio ruber HNIBRBA4764 RM systems
Ref: Shin,S.Y. et al. unpublished
REBASE ref # 37566
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,503,344 bp | CP134780 |
| chromosome 2: | 1,099,724 bp | CP134781 |
REBASE acronym: Vru4
Org_num: 71874
All begin RND59_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 2 | ||||
| 19220 | helix-turn-helix domain-containing protein | |||
| 19225 | M | M1.PspGSS17ORFAP (94% identity) | M2.Vru4ORF19225P | |
| 19230 | M | M2.VspVB16ORF10310P (94% identity) | M3.Vru4ORF19225P | |
| 19235 | S | S.MloMPLORF7987P (46% identity) | S.Vru4ORF19225P | |
| 19240 | R | PspCD3ORF425P (89% identity) | Vru4ORF19225P | |
| 19245 | AAA family ATPase | |||
| 19250 | 93 aa hypothetical protein | |||
| 19255 | M | M.Aan24636ORF2018P (40% identity) | M1.Vru4ORF19225P | |
| 19260 | HEPN domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1960 | DNA phosphorothioation-associated putative | |||
| 1965 | M | M.Vsp36DndBP (94% identity) | M.Vru4DndBP | |
| 1970 | DNA phosphorothioation system sulfurtransferase | |||
| 1965 | DNA sulfur modification protein DndB | |||
| 1970 | M | M.Vsp36DndCP (97% identity) | M.Vru4DndCP | |
| 1975 | DNA sulfur modification protein DndD | |||
| 1970 | DNA phosphorothioation system sulfurtransferase | |||
| 1975 | M | M.Vsp36DndDP (97% identity) | M.Vru4DndDP | |
| 1980 | DNA sulfur modification protein DndE | |||
| 1975 | DNA sulfur modification protein DndD | |||
| 1980 | M | M.Vsp36DndEP (91% identity) | M.Vru4DndEP | |
| 1985 | IS256 family transposase | |||
| 1995 | 111 aa hypothetical protein | |||
| 2000 | R | Vsp36DptHP (95% identity) | Vru4DptHP | |
| 2005 | DNA phosphorothioation-dependent restriction | |||
| 2000 | DNA phosphorothioation-dependent restriction | |||
| 2005 | R | PspHJ039DptGP (48% identity) | Vru4DptGP | |
| 2010 | DNA phosphorothioation-dependent restriction | |||
| 2005 | DNA phosphorothioation-dependent restriction | |||
| 2010 | R | Vsp36DptFP (96% identity) | Vru4DptFP | |
| 2015 | HEPN domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1985 | IS256 family transposase | |||
| 1990 | R | Gho33564GmrSDP (76% identity) | Vru4GmrSDP | |
| 1995 | 111 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 4580 | ribulose-phosphate 3-epimerase | |||
| 4585 | M | M.Vru23124ORFBP (100% identity) | M.Vru4ORF4585P | |
| 4590 | AAA family ATPase | |||