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Putative Pseudomonas aeruginosa pae001 RM systems
Ref: Li,D. et al. unpublished
REBASE ref # 37420
Sequence length: | GenBank #: | |
Chromosome: | 7,051,179 bp | CP133094 |
plasmid ppae01: | 448,610 bp | CP133095 |
REBASE acronym: Pae01
Org_num: 71313
All begin RBI07_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
12285 | peptidase M15 | |||
12290 | R | PaeCF19ORF24245P (100% identity) | Pae01ORF12300P | |
12295 | HNH endonuclease signature motif containing | |||
12300 | M | M.PaeCF19ORF24245P (100% identity) | M.Pae01ORF12300P | |
12305 | S | S.PaeCF19ORF24245P (100% identity) | S.Pae01ORF12300P | |
12310 | DUF262 domain-containing HNH endonuclease family | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
200 | DGQHR domain-containing protein | |||
205 | M | M.Pae5532DndEP (100% identity) | M.Pae01DndE2P | |
210 | DNA sulfur modification protein DndD | |||
205 | DNA sulfur modification protein DndE | |||
210 | M | M.PaeLo564DndDP (100% identity) | M.Pae01DndD2P | |
215 | DNA phosphorothioation system sulfurtransferase | |||
210 | DNA sulfur modification protein DndD | |||
215 | M | M.PaeLo564DndCP (100% identity) | M.Pae01DndC2P | |
220 | DNA sulfur modification protein DndB | |||
215 | DNA phosphorothioation system sulfurtransferase | |||
220 | M | M.PaeLo564DndBP (98% identity) | M.Pae01DndB2P | |
225 | 133 aa hypothetical protein | |||
22920 | nucleoid-associated protein YejK | |||
22925 | M | M.PspHORFAP (100% identity) | M.Pae01ORF22925P | |
22930 | Arc family DNA-binding protein | |||
24960 | (R)-3-hydroxydecanoyl-ACP:CoA transacylase | |||
24970 | M | M.Paezw26ORF5572P (100% identity) | M.Pae01ORF24970P | |
24975 | phage portal protein | |||
25190 | 208 aa hypothetical protein | |||
25195 | M | M.PaeZU31ORF28985P (100% identity) | M.Pae01ORF25195P | |
25200 | type II toxin-antitoxin system HicA family | |||
27360 | nucleoid-associated protein YejK | |||
27365 | M | M.PspAK6UORFCP (100% identity) | M.Pae01ORF27365P | |
27370 | Arc family DNA-binding protein | |||
plasmid ppae01 | ||||
33745 | 698 aa hypothetical protein | |||
33750 | M | M.PpuSY153ORFAP (63% identity) | M.Pae01ORF33750P | |
33755 | 256 aa hypothetical protein | |||
33815 | DGQHR domain-containing protein | |||
33820 | M | M.Pae5532DndEP (100% identity) | M.Pae01DndEP | |
33825 | DNA sulfur modification protein DndD | |||
33820 | DNA sulfur modification protein DndE | |||
33825 | M | M.PaeLo564DndDP (100% identity) | M.Pae01DndDP | |
33830 | DNA phosphorothioation system sulfurtransferase | |||
33825 | DNA sulfur modification protein DndD | |||
33830 | M | M.PaeLo564DndCP (100% identity) | M.Pae01DndCP | |
33835 | DNA sulfur modification protein DndB | |||
33830 | DNA phosphorothioation system sulfurtransferase | |||
33835 | M | M.PaeLo564DndBP (98% identity) | M.Pae01DndBP | |
33840 | 133 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
25625 | ATP-dependent endonuclease | |||
25630 | R | PspP16ORFGP (100% identity) | Pae01ORF25635P | |
25635 | M | M.PspP16ORFGP (100% identity) | M.Pae01ORF25635P | |
25640 | DUF262 domain-containing protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
12305 | restriction endonuclease subunit S | |||
12310 | R | PaeCF19GmrSD2P (100% identity) | Pae01GmrSDP | |
12315 | anti-phage ZorAB system protein ZorA | |||
28565 | MarR family transcriptional regulator | |||
28570 | R | PaeSH15MrrP (100% identity) | Pae01MrrP | |
28575 | class I SAM-dependent DNA methyltransferase |