Photobacterium damselae Pdd1605 |
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Putative Photobacterium damselae Pdd1605 RM systems
Ref: Zhang,Z. unpublished
REBASE ref # 26470
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,167,796 bp | CP073684 |
| chromosome 2: | 1,291,335 bp | CP073685 |
| plasmid p1: | 286,325 bp | CP073686 |
| plasmid p3: | 80,879 bp | CP073688 |
REBASE acronym: Pda1605
Org_num: 68140
Last updated: 05/06/2025 00:34
All begin KEC58_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid p3 | ||||
| 22450 | 56 aa hypothetical protein | |||
| 22455 | R | Vdi657MORF20190P (80% identity) | Pda1605ORF22460P | |
| 22460 | M | M.Pda7592ORF7125P (98% identity) | M.Pda1605ORF22460P | |
| 22100 | S | S.Vpa406ORF1945P (66% identity) | S.Pda1605ORF22460P | |
| 22105 | bacteriocin immunity protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1005 | AAA family ATPase | |||
| 1010 | M | M.PdaXP11DamP (100% identity) | GATC | M.Pda1605DamP |
| 1015 | DUF2970 domain-containing protein | |||
| chromosome 2 | ||||
| 15530 | alpha/beta fold hydrolase | |||
| 15535 | M | M.PdaP85ORF6315P (99% identity) | M.Pda1605ORF15535P | |
| 15540 | HD domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid p1 | ||||
| 21090 | DUF4391 domain-containing protein | |||
| 21095 | M | M.MspLL1ORF19090P (63% identity) | M.Pda1605ORF21095P | |
| 21100 | Tn3 family transposase | |||
| 21130 | sel1 repeat family protein | |||
| 21135 | M | M.PdaWu1ORF21935P (13% identity) | M.Pda1605ORF21135P | |
| 21140 | R | Pda210ORF19550P (98% identity) | Pda1605ORF21135P | |
| 21145 | 406 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 2 | ||||
| 18710 | LysR family transcriptional regulator | |||
| 18715 | R | PdaWMDP2ORF18290P (35% identity) | Pda1605ORF18715P | |
| 18720 | 196 aa hypothetical protein | |||
| 19290 | 188 aa hypothetical protein | |||
| 19295 | R | PdaRM71McrBP (100% identity) | Pda1605McrBP | |
| 19300 | R | PdaRM71McrCP (99% identity) | Pda1605McrCP | |
| 19305 | (deoxy)nucleoside triphosphate | |||