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Putative Escherichia coli KFS-D29 RM systems
Ref: Gomi,R. et al. unpublished
REBASE ref # 36781
Sequence length: | GenBank #: | |
Chromosome: | 4,732,148 bp | CP125009 |
plasmid pKFS-D29_1: | 115,174 bp | CP125007 |
REBASE acronym: EcoD29
Org_num: 67403
All begin QL146_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
15510 | IS1-like element IS1A family transposase | |||
15515 | R | Sso8ORF9335P (100% identity) | EcoD29ORF15515P | |
15520 | SprT family zinc-dependent metalloprotease | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1150 | LexA family transcriptional regulator | |||
1155 | M | M.SflLIN17ORF17440P (100% identity) | GATC | M.EcoD29ORF1155P |
1160 | PerC family transcriptional regulator | |||
3050 | HNH endonuclease | |||
3055 | R | SflSTLE4ORF19250P (100% identity) | EcoD29ORF3055P | |
3060 | restriction endonuclease | |||
7790 | cell division protein DamX | |||
7795 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoD29DamP |
7800 | ribulose-phosphate 3-epimerase | |||
8420 | DUF2556 family protein | |||
8425 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoD29ORF8425P |
8430 | DNA-binding transcriptional regulator Fis | |||
10105 | BREX-1 system phosphatase PglZ type A | |||
10110 | RM | EcoMN067ORF6665P (100% identity) | EcoD29ORF10110P | |
10115 | BREX system P-loop protein BrxC | |||
15220 | phosphohydrolase | |||
15225 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoD29DcmP |
15230 | V | V.EcoYJ4DcmP (100% identity) | V.EcoD29DcmP | |
15235 | drug/metabolite exporter YedA | |||
18815 | DUF3927 family protein | |||
18830 | M | M.SsoCS14ORF10750P (100% identity) | A | M.EcoD29ORF18830P |
18835 | TrmB family transcriptional regulator | |||
plasmid pKFS-D29_1 | ||||
225 | 73 aa hypothetical protein | |||
230 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoD29ORF230P |
235 | 103 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
23735 | IS3-like element IS3 family transposase | |||
23740 | R | Ecop10BGmrSDP (100% identity) | EcoD29GmrSDP | |
23745 | 28 aa hypothetical protein |