Escherichia coli ETEC4063 |
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Putative Escherichia coli ETEC4063 RM systems
Ref: Vereecke,N. et al. Front Microbiol 14, 1139312 (2023)
REBASE ref # 36777
| Sequence length: | GenBank #: | |
| Chromosome: | 5,038,256 bp | CP122700 |
| plasmid unnamed1: | 96,041 bp | CP122701 |
| plasmid unnamed2: | 170,800 bp | CP122702 |
| plasmid unnamed3: | 7,480 bp | CP122703 |
REBASE acronym: Eco4063
Org_num: 67362
All begin QDW63_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15475 | NADPH-dependent aldehyde reductase Ahr | |||
| 15485 | R | SflFF22ORF2075P (99% identity) | GACNNNNNNRTAAY | Eco4063ORF15495P |
| 15490 | S | S.SsoSE61ORF6540P (100% identity) | GACNNNNNNRTAAY | S.Eco4063ORF15495P |
| 15495 | M | M.SsoSE61ORF6540P (100% identity) | GACNNNNNNRTAAY | M.Eco4063ORF15495P |
| 15500 | DUF4942 domain-containing protein | |||
| plasmid unnamed1 | ||||
| 25050 | type II toxin-antitoxin system Phd/YefM family | |||
| 25055 | M | M.SspS13ORF175P (99% identity) | M.Eco4063ORF25055P | |
| 25060 | S | S.SspS13ORF175P (100% identity) | S.Eco4063ORF25055P | |
| 25065 | R | EcoXHORF21684P (99% identity) | Eco4063ORF25055P | |
| 25070 | 3-phosphatase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2685 | DUF808 domain-containing protein | |||
| ??? | V | V.EcoC1745DcmP (93% identity) | V.Eco4063DcmP | |
| 2700 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco4063DcmP |
| 2705 | phosphohydrolase | |||
| 5730 | PerC family transcriptional regulator | |||
| 5735 | M | M.Eal7ORF12210P (98% identity) | M.Eco4063ORF5735P | |
| 5740 | DUF1382 family protein | |||
| 6510 | replication endonuclease | |||
| 6515 | M | M.Kpn80148ORFEP (99% identity) | GATC | M.Eco4063ORF6515P |
| 6520 | TraR/DksA family transcriptional regulator | |||
| 10235 | DNA-binding transcriptional regulator Fis | |||
| 10240 | M | M.EcoC1745ORF2650P (100% identity) | ATGCAT | M.Eco4063ORF10240P |
| 10245 | DUF2556 family protein | |||
| 17490 | 67 aa hypothetical protein | |||
| 17495 | M | M.Sso63633ORF22290P (99% identity) | M.Eco4063ORF17495P | |
| 17500 | phage lysis protein EssD | |||
| 23520 | TrmB family transcriptional regulator | |||
| 23525 | M | M.EcoSTEC509ORF9935P (100% identity) | M.Eco4063ORF23525P | |
| 23545 | Shiga toxin Stx2e subunit A | |||
| plasmid unnamed1 | ||||
| 25180 | 85 aa hypothetical protein | |||
| 25185 | M | M.EfeC13ORF24760P (100% identity) | M.Eco4063ORF25185P | |
| 25190 | recombination-associated protein RdgC | |||
| plasmid unnamed2 | ||||
| 25940 | MbeD family mobilization/exclusion protein | |||
| 25945 | M | M.EcoH591ORF4942P (100% identity) | GGYRCC | M.Eco4063ORF25945P |
| ??? | R | Eco4063ORF26425P (100% identity) | GGYRCC | Eco4063ORF25945P |
| 25955 | IS91-like element IS91 family transposase | |||
| 26245 | 103 aa hypothetical protein | |||
| 26250 | M | M.EcoSTEC173ORF24360P (99% identity) | M.Eco4063ORF26250P | |
| 26255 | 73 aa hypothetical protein | |||
| plasmid unnamed3 | ||||
| 26415 | IS91-like element IS91 family transposase | |||
| ??? | R | Eco4063ORF25945P (100% identity) | GGYRCC | Eco4063ORF26425P |
| 26425 | M | M.EcoH591ORF4942P (100% identity) | GGYRCC | M.Eco4063ORF26425P |
| 26430 | MbeD family mobilization/exclusion protein | |||