Escherichia coli AVS0756 |
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Putative Escherichia coli AVS0756 RM systems
Ref: Biggel,M. unpublished
REBASE ref # 31800
| Sequence length: | GenBank #: | |
| Chromosome: | 4,848,357 bp | CP124481 |
| plasmid pAVS0756-A: | 108,535 bp | CP124482 |
REBASE acronym: EcoS0756
Org_num: 67314
All begin QJP55_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6210 | ash family protein | |||
| 6215 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoS0756ORF6220P |
| 6220 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoS0756ORF6220P |
| 6225 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoS0756ORF6220P |
| 6230 | type IV toxin-antitoxin system AbiEi family | |||
| plasmid pAVS0756-A | ||||
| 24080 | IS1-like element IS1A family transposase | |||
| 24085 | R | KpnKPH1ORF27575P (100% identity) | CAAYNNNNNNCTGG | EcoS0756ORF24095P |
| 24090 | S | S.SenceORFJP (100% identity) | CAAYNNNNNNCTGG | S1.EcoS0756ORF24095P |
| 24095 | M | M.SenceORFJP (99% identity) | CAAYNNNNNNCTGG | M.EcoS0756ORF24095P |
| 24100 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1705 | cell division protein DamX | |||
| 1710 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoS0756DamP |
| 1715 | ribulose-phosphate 3-epimerase | |||
| 3975 | 97 aa hypothetical protein | |||
| 3980 | R | Ecos19ORF20635P (100% identity) | EcoS0756ORF3980P | |
| 3985 | response regulator receiver domain | |||
| 3990 | ATP-binding protein | |||
| 3995 | M | M.Sen5773ORF4471P (100% identity) | RCCGGY | M.EcoS0756ORF3995P |
| 4000 | 174 aa hypothetical protein | |||
| 4265 | helix-turn-helix domain-containing protein | |||
| 4270 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoS0756ORF4270P |
| 4275 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoS0756ORF4270P |
| 4280 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoS0756ORF4270P |
| 4285 | McrC family protein | |||
| 16935 | Com family DNA-binding transcriptional | |||
| 16940 | M | M.EcoC1060ORF8400P (100% identity) | M.EcoS0756ORF16940P | |
| 16945 | flagella biosynthesis regulator Flk | |||
| 21965 | DNA-binding transcriptional regulator Fis | |||
| 21970 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoS0756ORF21970P |
| 21975 | DUF2556 family protein | |||
| plasmid pAVS0756-A | ||||
| 24020 | 73 aa hypothetical protein | |||
| 24025 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoS0756ORF24025P |
| 24030 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4280 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 4285 | R | EcosS9McrCP (100% identity) | EcoS0756McrCP | |
| 4290 | R | EcosS3McrBP (100% identity) | EcoS0756McrBP | |
| 4295 | glycosyltransferase | |||