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Putative Streptococcus suis Transconjugant cSFJ45 RM systems
Ref: Dai,X. et al. unpublished
REBASE ref # 36652
Complete sequence: 2,091,110 bp
GenBank #: CP102748
REBASE acronym: Ssu45
Org_num: 66954
All begin NWE21_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
3840 | FAD-containing oxidoreductase | |||
3845 | R | SsuiS10ORFCP (100% identity) | CCAANNNNNNTTC | Ssu45ORF3850P |
3850 | M | M.SsuiS10ORFCP (100% identity) | CCAANNNNNNTTC | M.Ssu45ORF3850P |
3855 | S | S.SsuiS10ORFCP (100% identity) | CCAANNNNNNTTC | S.Ssu45ORF3850P |
3860 | 310 aa hypothetical protein | |||
6860 | ribose-5-phosphate isomerase RpiA | |||
6865 | S | S2.SsucSS389ORF6590P (100% identity) | S2.Ssu45ORF6875P | |
6870 | S | S2.SsuiS10ORFBP (100% identity) | CCAANNNNNNTTC | S1.Ssu45ORF6875P |
6875 | M | M.SsuiS10ORFBP (100% identity) | M.Ssu45ORF6875P | |
6880 | R | SsuiS10ORFBP (100% identity) | Ssu45ORF6875P | |
6885 | tRNA uridine-5-carboxymethylaminomethyl(34) | |||
8430 | serine--tRNA ligase | |||
8435 | M | M.SsuiS10ORFAP (100% identity) | M.Ssu45ORF8435P | |
8440 | S | S.SsuiS10ORFAP (100% identity) | S.Ssu45ORF8435P | |
8445 | R | SsuiS10ORFAP (100% identity) | Ssu45ORF8435P | |
8450 | restriction endonuclease subunit S | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
2060 | IS3 family transposase | |||
2065 | M | M1.Ssu45ORF1815P (92% identity) | M1.Ssu45ORF2065P | |
2070 | M | M2.Ssu45ORF1815P (69% identity) | M2.Ssu45ORF2065P | |
2075 | 62 aa hypothetical protein | |||
2080 | R | Ssu45ORF1815P (71% identity) | Ssu45ORF2065AP | |
2085 | R | Ssu45ORF1815P (23% identity) | Ssu45ORF2065BP | |
2090 | 50 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
3790 | DUF3885 domain-containing protein | |||
??? | M | M.Ssu38828ORF3335P (96% identity) | M.Ssu45ORFAP | |
3800 | R | SsuiS10ORFEP (100% identity) | Ssu45ORFAP | |
3805 | IS200/IS605 family transposase | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
4575 | 262 aa hypothetical protein | |||
4580 | R | SsuiS10McrBP (100% identity) | Ssu45McrBP | |
4585 | R | SsucSS389McrCP (100% identity) | Ssu45McrCP | |
4590 | site-specific integrase |