Vibrio harveyi fish9 |
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Putative Vibrio harveyi fish9 RM systems
Ref: Zupicic,I.G. et al. unpublished
REBASE ref # 36341
Complete sequence: 3,684,379 bp
GenBank #: CP118608
REBASE acronym: Vhaf9
Org_num: 65560
All begin PWW31_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1970 | DUF4276 family protein | |||
| ??? | R | Vhaf3ORFCP (75% identity) | Vhaf9ORF1995P | |
| ??? | M | M.Vhaf3ORFCP (84% identity) | M.Vhaf9ORF1995P | |
| 2015 | S | S.Vhaf3ORFCP (52% identity) | S1.Vhaf9ORF1995P | |
| 2020 | S | S.Vhaf3ORFCP (23% identity) | S2.Vhaf9ORF1995P | |
| ??? | S | S.Vhaf3ORFCP (19% identity) | S3.Vhaf9ORF1995P | |
| 2025 | 206 aa hypothetical protein | |||
| 17805 | integrase | |||
| 17810 | M | M.Vpa2141ORF13340P (100% identity) | M.Vhaf9ORF17810P | |
| 17815 | AAA family ATPase | |||
| 17820 | S | S.Vhaf3ORFFP (96% identity) | S.Vhaf9ORF17810P | |
| 17825 | R | Vhaf3ORFFP (77% identity) | Vhaf9ORF17810BP | |
| 17830 | R | Vpa82E4ORF3360P (22% identity) | Vhaf9ORF17810AP | |
| 17835 | DUF2787 family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 820 | ribulose-phosphate 3-epimerase | |||
| 825 | M | M.Vha7DamP (99% identity) | GATC | M.Vhaf9DamP |
| 830 | AAA family ATPase | |||
| 3870 | 43 aa hypothetical protein | |||
| 3875 | M | M.Vhaf3ORFDP (96% identity) | M.Vhaf9ORF3875P | |
| 3880 | integrase arm-type DNA-binding domain-containing | |||
| 7590 | NupC/NupG family nucleoside CNT transporter | |||
| 7595 | M | M.Vhaf8ORFAP (97% identity) | M.Vhaf9ORF7595P | |
| 7600 | 441 aa hypothetical protein | |||
| 15575 | 222 aa hypothetical protein | |||
| 15580 | M | M.Vhaf3ORFGP (99% identity) | M.Vhaf9ORF15580P | |
| 15585 | tyrosine-type recombinase/integrase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 585 | 187 aa hypothetical protein | |||
| 590 | R | Vhaf6MrrP (100% identity) | Vhaf9MrrP | |
| 595 | type I restriction endonuclease subunit R | |||