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Putative Salmonella enterica subsp. enterica serovar Heidelberg RM101 RM systems
Ref: Lewis,G.L. et al. unpublished
REBASE ref # 36283
Sequence length: | GenBank #: | |
Chromosome: | 4,775,084 bp | CP117348 |
plasmid pRM101_1: | 180,389 bp | CP117349 |
plasmid pRM101_2: | 86,233 bp | CP117350 |
REBASE acronym: SenRM101
Org_num: 65369
All begin PQQ11_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
19885 | restriction endonuclease | |||
19890 | R | StyUK1IIP (99% identity) | GAGNNNNNNRTAYG | SenRM101ORF19895P |
19895 | M | M.Sens12373ORF19415P (100% identity) | GAGNNNNNNRTAYG | M.SenRM101ORF19895P |
19900 | S | S.SenW714ORF20250P (100% identity) | GAGNNNNNNRTAYG | S.SenRM101ORF19895P |
19905 | endoribonuclease SymE | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1935 | cell division protein DamX | |||
1940 | M | M.StyTDamP (100% identity) | GATC | M.SenRM101DamP |
1945 | ribulose-phosphate 3-epimerase | |||
2425 | DUF2556 family protein | |||
2430 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenRM101ORF2430P |
2435 | DNA-binding transcriptional regulator Fis | |||
9350 | phosphohydrolase | |||
9355 | M | M.SenZ223DcmP (100% identity) | CCWGG | M.SenRM101DcmP |
9360 | V | V.StyTDcmP (100% identity) | CCWGG | V.SenRM101DcmP |
9365 | drug/metabolite exporter YedA | |||
14470 | YqaJ viral recombinase family protein | |||
14475 | M | M.Sens12373ORF14090P (100% identity) | GATC | M.SenRM101ORF14475P |
14480 | DUF4060 family protein | |||
20025 | YebC/PmpR family DNA-binding transcriptional | |||
20030 | R | Sens12373ORF19550P (100% identity) | SenRM101ORF20030P | |
20035 | fosfomycin resistance glutathione transferase | |||
20060 | DEAD/DEAH box helicase | |||
20065 | R | Ssp8103ORF19050P (100% identity) | SenRM101ORF20065P | |
20070 | 104 aa hypothetical protein | |||
plasmid pRM101_1 | ||||
24035 | IS1 family transposase | |||
24040 | M | M.Ubap201ORF4P (100% identity) | CCWGG | M.SenRM101ORF24040P |
24045 | R | Ssp3CORF24390P (100% identity) | CCWGG | SenRM101ORF24040P |
24050 | IS6-like element IS26 family transposase | |||
plasmid pRM101_2 | ||||
24305 | 103 aa hypothetical protein | |||
24310 | M | M.SspPIBORF23080P (100% identity) | M.SenRM101ORF24310P | |
24315 | 73 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
17565 | small effector SsaA | |||
17570 | R | Sens12373ORF17180P (100% identity) | CAGAG | SenRM101ORF17575P |
17575 | M | M.SenZ223ORF2150P (100% identity) | CAGAG | M.SenRM101ORF17575P |
17580 | MFS transporter | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
19880 | BrnT family toxin | |||
19885 | R | StyUK1MrrP (100% identity) | SenRM101MrrP | |
19890 | type I restriction-modification system |