|
Putative Rhodococcus species Z13 RM systems
Ref: Long,X. and Zang,M. unpublished
REBASE ref # 35605
Complete sequence: 4,532,339 bp
GenBank #: CP107551
REBASE acronym: RspZ13
Org_num: 63158
All begin OED52_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
19250 | CD225/dispanin family protein | |||
19255 | R | Rrh10210ORF4534P (88% identity) | RspZ13ORF19310P | |
19260 | DUF4352 domain-containing protein | |||
19265 | DUF2510 domain-containing protein | |||
19270 | DinB family protein | |||
19275 | YdcF family protein | |||
19280 | RNA polymerase sigma-70 factor | |||
19285 | FAD-dependent oxidoreductase | |||
19290 | PASTA domain-containing protein | |||
19295 | XRE family transcriptional regulator | |||
19300 | S | S.Ncy6504I (53% identity) | S.RspZ13ORF19310P | |
19305 | IS5 family transposase | |||
19310 | M | M.Rco10994ORF1938P (67% identity) | M.RspZ13ORF19310BP | |
??? | M | M.RspP14ORFCP (17% identity) | M.RspZ13ORF19310AP | |
19320 | 301 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
6540 | HNH endonuclease | |||
6545 | M | M.RruSD3DndAP (87% identity) | M.RspZ13DndAP | |
6550 | DNA sulfur modification protein DndB | |||
6545 | cysteine desulfurase DndA | |||
6550 | M | M.RruSD3DndBP (87% identity) | M.RspZ13DndBP | |
6555 | DNA phosphorothioation system sulfurtransferase | |||
6550 | DNA sulfur modification protein DndB | |||
6555 | M | M.RspRDE2DndCP (96% identity) | M.RspZ13DndCP | |
6560 | DNA sulfur modification protein DndD | |||
6555 | DNA phosphorothioation system sulfurtransferase | |||
6560 | M | M.RruSD3DndDP (88% identity) | M.RspZ13DndDP | |
6565 | DNA sulfur modification protein DndE | |||
6560 | DNA sulfur modification protein DndD | |||
6565 | M | M.RruSD3DndEP (91% identity) | M.RspZ13DndEP | |
6570 | DNA phosphorothioation-associated putative | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
5625 | carotenoid oxygenase family protein | |||
5630 | R | RspPD04MrrP (91% identity) | RspZ13MrrP | |
5635 | DUF1906 domain-containing protein |