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Putative Escherichia coli 961 RM systems
Ref: Shropshire,W.C. et al. mSystems (2022) In press
REBASE ref # 35163
Sequence length: | GenBank #: | |
Chromosome: | 4,926,657 bp | CP103645 |
plasmid pMB5823_1: | 187,551 bp | CP103646 |
plasmid pMB5823_2: | 90,382 bp | CP103647 |
plasmid pMB5823_5: | 3,986 bp | CP103650 |
REBASE acronym: Eco961
Org_num: 61538
All begin M5R18_
Type II | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1690 | cell division protein DamX | |||
1695 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco961DamP |
1700 | ribulose-phosphate 3-epimerase | |||
2325 | DUF2556 family protein | |||
2330 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco961ORF2330P |
2335 | DNA-binding transcriptional regulator Fis | |||
9525 | phosphohydrolase | |||
9530 | M | M.EcosEC5DcmP (100% identity) | CCWGG | M.Eco961DcmP |
9535 | V | V.EcosEC7DcmP (100% identity) | CCWGG | V.Eco961DcmP |
9540 | drug/metabolite exporter YedA | |||
18440 | zinc ribbon domain-containing protein | |||
18445 | M | M.EcosEC31ORF18555P (100% identity) | GGTACC | M.Eco961ORF18445P |
18450 | tyrosine-type recombinase/integrase | |||
20215 | HNH endonuclease | |||
20220 | R | Sso8ORF19860P (100% identity) | Eco961ORF20220P | |
20225 | 55 aa hypothetical protein | |||
plasmid pMB5823_1 | ||||
23840 | 103 aa hypothetical protein | |||
23845 | M | M.KpnVA569ORF28145P (100% identity) | M.Eco961ORF23845P | |
23850 | 73 aa hypothetical protein | |||
plasmid pMB5823_2 | ||||
25040 | 103 aa hypothetical protein | |||
25045 | M | M.EcoH4ORFBP (100% identity) | M.Eco961ORF25045P | |
25050 | 73 aa hypothetical protein | |||
plasmid pMB5823_5 | ||||
25545 | R | SsoI (100% identity) | GAATTC | Eco961ORF25550P |
25550 | M | M.SsoI (99% identity) | GAATTC | M.Eco961ORF25550P |