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Putative Pelodictyon phaeoclathratiforme BU-1 RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 10679
Sequence length: | GenBank #: | |
Chromosome: | 3,018,238 bp | CP001110 (NC_011060) |
Chromosome: | 2,967,835 bp | AAIK00000000 (NZ_AAIK00000000) |
REBASE acronym: PphBU
Org_num: 4397
All begin Ppha_, PphaDRAFT_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
741 | phage resistance protein | |||
743 | R | Smy11118IP (69% identity) | PphBUORF750P | |
744 | 85 aa hypothetical protein | |||
745 | S | S2.AfeYL25ORF11280P (48% identity) | S.PphBUORF750P | |
746 | 172 aa conserved hypothetical protein | |||
747 | 66 aa conserved hypothetical protein | |||
748 | 76 aa conserved hypothetical protein | |||
749 | 288 aa conserved hypothetical protein | |||
750 | M | M.PspGSB1ORF8435P (82% identity) | M.PphBUORF750P | |
751 | Sel1 domain protein repeat-containing protein | |||
752 | 275 aa hypothetical protein | |||
??? | M | type I restriction-modification system subunit M | M.PphBUORF753P | |
754 | prevent-host-death family protein | |||
912 | molybdopterin oxidoreductase | |||
913 | M | N-6 DNA methylase | M.PphBUORF913P | |
914 | protein of unknown function DUF497 | |||
973 | 362 aa hypothetical protein | |||
??? | M | 120 aa hypothetical protein ACD_39C01819G0001, partial | M.PphBUORF974P | |
975 | transcriptional regulator, XRE family | |||
1216 | periplasmic binding protein | |||
1217 | R | GspEPRMORF9300P (79% identity) | PphBUORF1218P | |
1218 | M | M.GspEPRMORF9300P (84% identity) | M.PphBUORF1218P | |
1219 | S | S.AxeHF10ORF14760P (38% identity) | S.PphBUORF1218P | |
1220 | pentapeptide repeat protein | |||
1451 | 53 aa hypothetical protein | |||
1452 | S | S.Dco13527V (40% identity) | S.PphBUORF1454P | |
1453 | 63 aa hypothetical protein | |||
1454 | M | M.Cph266ORF1130P (96% identity) | M.PphBUORF1454P | |
1455 | transcriptional regulator | |||
1456 | R | Cph266ORF1130P (97% identity) | PphBUORF1454P | |
1458 | PEBP family protein | |||
1600 | 351 aa conserved hypothetical protein | |||
1601 | S | S.Psp741ORF26925P (48% identity) | S.PphBUORF1601P | |
1602 | 118 aa hypothetical protein | |||
1603 | 72 aa conserved hypothetical protein | |||
1604 | M | M.CphKB01ORFFP (24% identity) | M.PphBUORF1601P | |
1607 | peptidase C14 caspase catalytic subunit p20 | |||
2392 | 416 aa conserved hypothetical protein | |||
??? | S | 95 aa hypothetical protein | S.PphBUORF2396P | |
2395 | protein of unknown function DUF1016 | |||
??? | M | SAM-dependent DNA methyltransferase | M.PphBUORF2396P | |
2397 | diacylglycerol kinase catalytic region | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
152 | SpoVT/AbrB-like protein | |||
153 | M | DNA methylase N-4 | M.PphBUORF153P | |
154 | 43 aa hypothetical protein | |||
162 | 160 aa conserved hypothetical protein | |||
163 | M | DNA methylase N-4 | CTAG | M.PphBUORF163AP |
164 | transcriptional regulator, XRE family | |||
165 | protein of unknown function DUF1044 | |||
??? | M | DNA methylase N-4/N-6 domain-containing protein | CTAG | M.PphBUORF163BP |
167 | 147 aa conserved hypothetical protein | |||
275 | 202 aa conserved hypothetical protein | |||
??? | M | M.Bpr4ORF5820P (21% identity) | M.PphBUORF276AP | |
277 | transposase IS4 family protein | |||
??? | M | M.Bpr4ORF5820P (37% identity) | M.PphBUORF276BP | |
278 | helicase domain protein | |||
673 | acyltransferase 3 | |||
675 | M | M.CphKB01ORFAP (86% identity) | CTAG | M1.PphBUORF675P |
676 | M | M.GhaSAP1ORF16085P (61% identity) | M2.PphBUORF675P | |
??? | R | TspsG1ORF1671P (66% identity) | PphBUORF675P | |
678 | 54 aa hypothetical protein Cpha266_1755 | |||
679 | 54 aa hypothetical protein | |||
??? | R | PspGSB1ORF360P (28% identity) | CTAG | PphBUORF2054P |
681 | 108 aa conserved hypothetical protein | |||
1420 | TPR repeat-containing protein | |||
1421 | RM | Cph266ORF1300P (29% identity) | PphBUORF1421P | |
1422 | helicase domain protein | |||
2037 | 1211 aa conserved hypothetical protein | |||
2038 | RM | PspHL130ORF7540P (59% identity) | PphBUORF2038P | |
2039 | protein of unknown function DUF1016 | |||
2194 | prevent-host-death family protein | |||
??? | R | 71 aa conserved hypothetical cytosolic protein | CAGCTG | PphBUORF2196P |
2196 | M | M.CphKB01ORFMP (88% identity) | CAGCTG | M.PphBUORF2196P |
2197 | 60 aa conserved hypothetical protein | |||
2868 | Abortive infection protein | |||
2869 | M | M.MpsM2ORF12165P (73% identity) | CCGCGG | M.PphBUORF2869P |
2870 | R | MpsSph1ORF3237P (80% identity) | CCGCGG | PphBUORF2869P |
2871 | pseudogene | |||
2911 | helicase domain protein | |||
2912 | RM | CphKB01ORFIAP (28% identity) | PphBUORF2911P | |
2913 | 517 aa hypothetical protein | |||
Chromosome | ||||
2063 | 108 aa conserved hypothetical protein | |||
2054 | R | PspGSB1ORF360P (28% identity) | CTAG | PphBUORF2054P |
2055 | HNH endonuclease | |||
2249 | 162 aa conserved hypothetical protein | |||
??? | M | DNA methylase N-4/N-6 domain-containing protein | CTAG | M.PphBUORF163P |
2250 | Helix-turn-helix motif | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
341 | 599 aa hypothetical protein | |||
342 | M | M.MspSC29ORF12100P (69% identity) | M.PphBUORF342P | |
343 | 167 aa hypothetical protein | |||
344 | R | SspF21ORF8510P (67% identity) | PphBUORF342P | |
345 | protein-S-isoprenylcysteine | |||
1127 | 252 aa conserved hypothetical protein | |||
1128 | M | M.MmaLYCORF2622P (55% identity) | M.PphBUORF1128P | |
1129 | protein of unknown function DUF1016 | |||
1130 | R | MspIM1ORF13175P (80% identity) | PphBUORF1128P | |
1131 | toll/interleukin-1 receptor domain-containing protein | |||
1978 | protein of unknown function DUF323 | |||
1979 | R | Cli1677ORF9975P (76% identity) | PphBUORF1980P | |
1980 | M | M.DbaSRB1ORF275P (68% identity) | M.PphBUORF1980P | |
1981 | 69 aa hypothetical protein | |||
2238 | 266 aa hypothetical protein | |||
2239 | R | CspMVAYORF10240P (59% identity) | PphBUORF2240P | |
2240 | M | M.Pco19001ORF22915P (59% identity) | M.PphBUORF2240P | |
2241 | transcriptional regulator | |||
Chromosome | ||||
1720 | 252 aa conserved hypothetical protein | |||
1721 | M | M.MmaLYCORF2622P (55% identity) | M.PphBUORF1128P | |
1722 | Protein of unknown function DUF1016 | |||
1723 | R | MspIM1ORF13175P (80% identity) | PphBUORF1128P | |
1724 | 251 aa hypothetical protein |