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Putative Mannheimia haemolytica 0729 RM systems
Ref: Boguski,M. and Hill,J.E. unpublished
REBASE ref # 34024
Complete sequence: 2,591,238 bp
GenBank #: CP059327
REBASE acronym: Mha0729
Org_num: 56464
All begin H1D03_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
120 | DNA topoisomerase (ATP-hydrolyzing) subunit A | |||
125 | M | M.MhaS45ORF1324P (100% identity) | M.Mha0729ORF125P | |
130 | S | S.Mha0745ORF8355P (99% identity) | GAYNNNNNNTAYG | S.Mha0729ORF125P |
135 | anticodon nuclease | |||
140 | R | Mha0728ORF10385P (99% identity) | Mha0729ORF125P | |
145 | ABC transporter ATP-binding protein | |||
4670 | YacL family protein | |||
4675 | M | M.MhaD171ORF2370P (99% identity) | M.Mha0729ORF4675P | |
4680 | S | S.Mhas184ORF7710P (99% identity) | TGAANNNNNTTC | S.Mha0729ORF4675P |
4685 | FRG domain-containing protein | |||
4690 | R | Mha0728ORF2040P (100% identity) | Mha0729ORF4675P | |
4695 | bifunctional [glutamate--ammonia | |||
7510 | bifunctional glutamate--cysteine ligase | |||
7515 | S | S2.MhaS45ORF242P (99% identity) | GNGAYNNNNNNNRTTG | S2.Mha0729ORF7535P |
7520 | tyrosine-type recombinase/integrase | |||
7525 | S | S1.Pba12565ORF1955P (87% identity) | GNGAYNNNNNNNNTGT | S1.Mha0729ORF7535P |
7530 | DNA binding domain-containing protein | |||
7535 | M | M.Mha0768ORF40P (99% identity) | M.Mha0729ORF7535P | |
7540 | R | Mha0597ORF12245P (99% identity) | Mha0729ORF7535P | |
7545 | phosphatidylserine decarboxylase | |||
12595 | methionine synthase | |||
12600 | M | M.MhaD171ORF9810P (99% identity) | M.Mha0729ORF12600P | |
12605 | S | S.MhaD171ORF9810P (64% identity) | S1.Mha0729ORF12600P | |
12610 | S | S2.Mhas184ORF2820P (100% identity) | CAACNNNNNTC | S2.Mha0729ORF12600P |
12615 | 211 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
620 | enoyl-CoA hydratase | |||
625 | M | M.MhaS45ORF303P (87% identity) | M.Mha0729ORF625P | |
630 | DNA-binding domain-containing protein | |||
4060 | DUF1367 family protein | |||
4065 | M | M.Mha39394ORF7105P (100% identity) | M.Mha0729ORF4065P | |
4070 | conserved phage C-terminal domain-containing | |||
5630 | sodium-dependent transporter | |||
5635 | M | M.MhaS45ORF2443P (99% identity) | GATC | M.Mha0729ORF5635P |
5640 | 3-dehydroquinate synthase | |||
6380 | DUF968 domain-containing protein | |||
6385 | M | M.Mha9712ORF539P (100% identity) | M.Mha0729ORF6385P | |
6390 | conserved phage C-terminal domain-containing | |||
6495 | Com family DNA-binding transcriptional | |||
6500 | M | M.MhaS45ORF400P (100% identity) | BA | M.Mha0729ORF6500P |
6505 | 63 aa hypothetical protein | |||
8190 | replication protein | |||
8195 | M | M.MhaMH070ORF1284P (100% identity) | GATC | M.Mha0729ORF8195P |
8200 | DUF1367 family protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
2895 | IS481 family transposase | |||
2900 | R | MhaD171ORF875P (100% identity) | GACAT | Mha0729ORF2905P |
??? | M | M.Mha0745ORF11135P (99% identity) | GACAT | M.Mha0729ORF2905P |
2915 | trimethylamine-N-oxide reductase TorA | |||
4375 | DNA topoisomerase (ATP-hydrolyzing) subunit B | |||
4380 | R | Mha0728ORF1750P (100% identity) | GTTAAT | Mha0729ORF4385P |
4385 | M | M.Mha0597ORF8940P (99% identity) | GTTAAT | M.Mha0729ORF4385P |
4390 | adenine methyltransferase |