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Putative Escherichia coli 7386Nal RM systems
Ref: Kalalah,A. and Eppinger,M. unpublished
REBASE ref # 33364
Complete sequence: 5,394,199 bp
GenBank #: CP089031
REBASE acronym: Eco7386Na1
Org_num: 53571
All begin CO543_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
23710 | DUF262 domain-containing HNH endonuclease family | |||
23715 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco7386Na1ORF23720P |
23720 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco7386Na1ORF23720P |
23725 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco7386Na1ORF23720P |
23730 | endoribonuclease SymE | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
2815 | DUF2556 family protein | |||
2820 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco7386Na1ORF2820P |
2825 | DNA-binding transcriptional regulator Fis | |||
7490 | DUF1382 family protein | |||
7495 | M | M.EspP079ORF2847P (100% identity) | GATC | M.Eco7386Na1ORF7495P |
7500 | 55 aa hypothetical protein | |||
7675 | HNH endonuclease | |||
7680 | M | M.EcoTWORF3263P (100% identity) | GATC | M.Eco7386Na1ORF7680P |
7685 | NinE family protein | |||
10405 | recombination protein NinB | |||
10410 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco7386Na1ORF10410P |
10415 | NinE family protein | |||
11660 | TrmB family transcriptional regulator | |||
11665 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco7386Na1ORF11665P | |
11680 | DUF1737 domain-containing protein | |||
17675 | drug/metabolite exporter YedA | |||
17680 | V | V.EcosPA8DcmP (100% identity) | CCWGG | V.Eco7386Na1DcmP |
17685 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco7386Na1DcmP |
17690 | phosphohydrolase | |||
23945 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco7386Na1ORF23945P |
23950 | DEAD/DEAH box helicase | |||
23980 | N-acetylneuraminic acid mutarotase | |||
23985 | R | EcosPA8ORF17350P (100% identity) | Eco7386Na1ORF23985P | |
23990 | transposase | |||
25215 | Eae protein | |||
25220 | M | M.EcosPA8ORF16100P (100% identity) | M.Eco7386Na1ORF25220P | |
25225 | 65 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
23730 | endoribonuclease SymE | |||
23735 | R | EcosPA8GmrSDP (55% identity) | Eco7386Na1GmrDP | |
23740 | R | Ecos1613GmrSP (100% identity) | Eco7386Na1GmrSP | |
23745 | cytoplasmic protein |