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Putative Neisseria gonorrhoeae O2D156 RM systems
Ref: Jen,F. et al. unpublished
REBASE ref # 32838
Complete sequence: 2,165,933 bp
GenBank #: CP078113
REBASE acronym: Ngo156
Org_num: 51160
All begin KWY94_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
5080 | ADP-glyceromanno-heptose 6-epimerase | |||
5085 | M | M.NgoJH7ORFLP (100% identity) | GCANNNNNNNGTC | M.Ngo156ORF5085P |
5090 | DNA damage-inducible protein D | |||
??? | S | S.NgoTFGB2ORFAP (100% identity) | GCANNNNNNNGTC | S.Ngo156ORF5085P |
5105 | R | NgoWSIIP (100% identity) | GCANNNNNNNGTC | Ngo156ORF5085P |
5110 | ATP-dependent Clp protease ATP-binding subunit | |||
7530 | ABC transporter | |||
7535 | M | M.NgoD159ORF3795P (100% identity) | GAGNNNNNTAC | M.Ngo156ORF7535P |
7540 | 280 aa hypothetical protein | |||
7545 | 186 aa hypothetical protein | |||
7550 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.Ngo156ORF7535P |
7555 | hydroxyacid dehydrogenase | |||
7560 | R | NgoCT213ORF3510P (99% identity) | GAGNNNNNTAC | Ngo156ORF7535P |
7565 | replication-associated recombination protein A | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
715 | cysteine--tRNA ligase | |||
720 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo156ORF725P |
725 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo156ORF725P |
730 | GTPase ObgE | |||
1245 | RNA-binding transcriptional accessory protein | |||
1250 | M | M2.Ngos1291II (100% identity) | GGTGA | M1.Ngo156I |
1255 | M | M1.Ngos1291II (100% identity) | GGTGA | M2.Ngo156I |
1260 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo156IP |
1265 | 93 aa hypothetical protein | |||
1840 | ribosome recycling factor | |||
1845 | M | M.Ngos1291ORF3515P (99% identity) | GGCC | M.Ngo156ORF1845P |
??? | R | NgoWSORF2276P (100% identity) | GGCC | Ngo156ORF1845P |
1860 | FUSC family protein | |||
2705 | leucine--tRNA ligase | |||
2710 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo156ORF2710P |
??? | modification methylase DpnIIB | |||
2710 | restriction endonuclease | |||
??? | M | M.NgoWPORF8P (100% identity) | M.Ngo156ORF2715P | |
2725 | 184 aa hypothetical protein | |||
3920 | transposase | |||
3925 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo156ORF3925P |
3930 | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo156ORF3925P |
3935 | excinuclease ABC subunit UvrA | |||
4545 | phenylalanine--tRNA ligase subunit alpha | |||
4550 | V | V.NgoWSORF391P (100% identity) | V.Ngo156ORF4555P | |
??? | M | M.NgoWSORF391P (100% identity) | M.Ngo156ORF4555P | |
4565 | R | Npo18661ORFHP (100% identity) | Ngo156ORF4555P | |
4570 | phenylalanine--tRNA ligase subunit beta | |||
4840 | IS1595 family transposase | |||
4845 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | Ngo156ORF4845P |
4850 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.Ngo156ORF4845P |
4855 | 140 aa hypothetical protein | |||
4875 | uroporphyrinogen decarboxylase | |||
4880 | H | H.Ngos1291ORF7560P (100% identity) | H.Ngo156ORF4890P | |
4885 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo156ORF4890P |
4890 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo156ORF4890P |
4895 | DNA repair protein RadA | |||
6685 | 5-(carboxyamino)imidazole ribonucleotide | |||
6690 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo156ORF6695P |
6695 | M | M.NgoWLORF1156P (100% identity) | GCCGGC | M.Ngo156ORF6695P |
6700 | anthranilate synthase component I | |||
7660 | 3-isopropylmalate dehydratase small subunit | |||
7665 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo156ORF7665P |
7670 | R | Ngos1291ORF9120P (100% identity) | GGNNCC | Ngo156ORF7665P |
7675 | 3-isopropylmalate dehydrogenase | |||
10850 | replication initiation factor domain-containing | |||
10855 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo156ORF10865P | |
10860 | R | Ngos1291ORF65P (100% identity) | CCGG | Ngo156ORF10865P |
??? | M | M.NgoMS11ORF8845P (100% identity) | CCGG | M.Ngo156ORF10865P |
10875 | 48 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
7840 | tRNA pseudouridine(55) synthase TruB | |||
??? | M | M.Ngo2679ORFAP (99% identity) | M.Ngo156ORFAP | |
7850 | R | Ngo207ORF7150P (99% identity) | Ngo156ORFAP | |
7855 | alpha-hydroxy-acid oxidizing protein | |||
8305 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
8310 | R | NgoWPIIP (100% identity) | CCACC | Ngo156ORF8315P |
8315 | M | M.Ngos1291ORF8455P (100% identity) | CCACC | M.Ngo156ORF8315P |
8320 | peptidyl-prolyl cis-trans isomerase |