Shewanella species FJAT-51800 |
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Putative Shewanella species FJAT-51800 RM systems
Ref: Liu,G. and Zhang,Q. unpublished
REBASE ref # 32378
Complete sequence: 4,201,682 bp
GenBank #: CP071503
REBASE acronym: Ssp51800
Org_num: 49157
All begin JYB87_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 390 | helix-turn-helix transcriptional regulator | |||
| 395 | R | VtuFP17ORF12790P (89% identity) | Ssp51800ORF405P | |
| 400 | S | S.Vch69ORF1407P (57% identity) | S.Ssp51800ORF405P | |
| 405 | M | M.Tau9187ORF1220P (93% identity) | M.Ssp51800ORF405P | |
| 410 | tyrosine-type recombinase/integrase | |||
| 1440 | cytochrome c5 family protein | |||
| 1445 | R | SalA59ORF1870P (89% identity) | Ssp51800ORF1455P | |
| 1450 | Fic family protein | |||
| 1455 | M | M.SspANAORF2961P (90% identity) | M.Ssp51800ORF1455P | |
| 1460 | S | S.AjeMS1ORF2116P (34% identity) | S.Ssp51800ORF1455P | |
| 1465 | 476 aa hypothetical protein | |||
| 18550 | 45 aa hypothetical protein | |||
| 18555 | S | S.SalHIDEORF22120P (60% identity) | S.Ssp51800ORF18560P | |
| 18560 | M | M.Vpa19139ORFCP (96% identity) | M.Ssp51800ORF18560P | |
| 18565 | R | Vpa9109ORF15705P (99% identity) | Ssp51800ORF18560P | |
| 18570 | helix-turn-helix transcriptional regulator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12825 | 440 aa hypothetical protein | |||
| 12830 | M | M.SbaM1ORF4735P (77% identity) | M.Ssp51800ORF12830P | |
| 12835 | transposase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7935 | plasmid recombination protein | |||
| 7940 | M | M.Kox71151ORFEP (89% identity) | M.Ssp51800ORF7940P | |
| 7945 | R | ValZJORF11455P (95% identity) | Ssp51800ORF7940P | |
| 7950 | endonuclease III | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1945 | AAA family ATPase | |||
| ??? | M | M.Ssp54481ORF16005P (75% identity) | M.Ssp51800ORF1950P | |
| 1955 | 118 aa hypothetical protein | |||