Escherichia coli RIVM_C029033 |
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Putative Escherichia coli RIVM_C029033 RM systems
Ref: Hendrickx,A.P.A. et al. unpublished
REBASE ref # 31854
Complete sequence: 5,230,678 bp
GenBank #: CP068813
REBASE acronym: Eco29033
Org_num: 46780
All begin JNN62_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 440 | MmcB family DNA repair protein | |||
| 445 | R | EcoCase6ORF480P (100% identity) | CAAYNNNNNCTGC | Eco29033ORF450P |
| 450 | M | M.SflN116ORF3940P (100% identity) | CAAYNNNNNCTGC | M.Eco29033ORF450P |
| 455 | S | S.SflN116ORF3940P (100% identity) | CAAYNNNNNCTGC | S.Eco29033ORF450P |
| 460 | AAA family ATPase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2075 | cell division protein DamX | |||
| 2080 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco29033DamP |
| 2085 | ribulose-phosphate 3-epimerase | |||
| 2610 | DUF2556 family protein | |||
| 2615 | M | M.Sdy12039ORFBP (100% identity) | ATGCAT | M.Eco29033ORF2615P |
| 2620 | DNA-binding transcriptional regulator Fis | |||
| 6705 | 344 aa hypothetical protein | |||
| 6710 | R | EcoGTEN97ORFFP (100% identity) | Eco29033ORF6715P | |
| 6715 | M | M.EcoT040ORF14860P (97% identity) | M.Eco29033ORF6715P | |
| 6720 | tyrosine-type recombinase/integrase | |||
| 10635 | phosphohydrolase | |||
| 10640 | M | M.Ecos135DcmP (100% identity) | CCWGG | M.Eco29033DcmP |
| 10645 | V | V.SflFF64DcmP (100% identity) | V.Eco29033DcmP | |
| 10650 | drug/metabolite exporter YedA | |||
| 11210 | TrmB family transcriptional regulator | |||
| 11215 | M | M.SflJ17BORF23540P (100% identity) | A | M.Eco29033ORF11215P |
| 11235 | class II holin family protein | |||
| 22075 | 174 aa hypothetical protein | |||
| 22080 | M | M.Sen5773ORF4471P (100% identity) | RCCGGY | M.Eco29033ORF22080P |
| 22085 | ATP-binding protein | |||
| 22090 | 126 aa hypothetical protein | |||
| 22095 | R | Ecou021ORF20225P (100% identity) | Eco29033ORF22095P | |
| 22100 | 97 aa hypothetical protein | |||