|
Putative Salmonella enterica subsp. enterica serovar Typhimurium AB42052 RM systems
Ref: Cohen,E. et al. unpublished
REBASE ref # 31885
Complete sequence: 4,860,617 bp
GenBank #: CP064918
REBASE acronym: Sen42052
Org_num: 46929
All begin IRY58_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
23255 | endoribonuclease SymE | |||
23260 | S | S.Sen42142ORF23310P (100% identity) | GAGNNNNNNRTAYG | S.Sen42052ORF23265P |
23265 | M | M.Sen42142ORF23310P (100% identity) | GAGNNNNNNRTAYG | M.Sen42052ORF23265P |
23270 | R | Sen42142ORF23310P (99% identity) | GAGNNNNNNRTAYG | Sen42052ORF23265P |
23275 | restriction endonuclease | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
10300 | drug/metabolite exporter YedA | |||
10305 | V | V.SenSTy03DcmP (98% identity) | V.Sen42052DcmP | |
10310 | M | M.StyUK1Dcm (99% identity) | CCWGG | M.Sen42052DcmP |
10315 | phosphohydrolase | |||
10545 | RusA family crossover junction | |||
10550 | M | M.StyUK1V (100% identity) | GATC | M.Sen42052ORF10550P |
10555 | PerC family transcriptional regulator | |||
13885 | 92 aa hypothetical protein | |||
13890 | M | M.Sen42142ORF13895P (99% identity) | M.Sen42052ORF13890P | |
13895 | ead/Ea22-like family protein | |||
17520 | DNA-binding transcriptional regulator Fis | |||
17525 | M | M.Sen42142ORF17525P (100% identity) | ATGCAT | M.Sen42052ORF17525P |
17530 | DUF2556 family protein | |||
21075 | cell division protein DamX | |||
21080 | M | M.Sen42086DamP (100% identity) | GATC | M.Sen42052DamP |
21085 | ribulose-phosphate 3-epimerase | |||
23105 | ATP-binding protein | |||
23110 | RM | Sen42086ORF23155P (100% identity) | GATCAG | Sen42052ORF23110P |
23115 | BREX system P-loop protein BrxC | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
2135 | MFS transporter | |||
2140 | M | M.Sen42086ORF2150P (100% identity) | CAGAG | M.Sen42052ORF2140P |
2145 | R | Sen42142ORF2165P (99% identity) | CAGAG | Sen42052ORF2140P |
2150 | 33 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
23270 | type I restriction-modification system | |||
23275 | R | Sen42086Mrr2P (100% identity) | Sen42052MrrP | |
23280 | BrnT family toxin |