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Putative Salmonella enterica subsp. enterica serovar Typhimurium S304 RM systems
Ref: Hua,X. and Yu,Y. unpublished
REBASE ref # 24129
Sequence length: | GenBank #: | |
Chromosome: | 4,937,766 bp | CP061126 |
plasmid pS304_1: | 254,873 bp | CP061127 |
REBASE acronym: SenS304
Org_num: 46942
All begin IBY93_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
20275 | restriction endonuclease | |||
20280 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenS304ORF20285P |
20285 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.SenS304ORF20285P |
20290 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenS304ORF20285P |
20295 | endoribonuclease SymE | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1815 | cell division protein DamX | |||
1820 | M | M.StyTDamP (100% identity) | GATC | M.SenS304DamP |
1825 | ribulose-phosphate 3-epimerase | |||
2310 | DUF2556 family protein | |||
2315 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenS304ORF2315P |
2320 | DNA-binding transcriptional regulator Fis | |||
6320 | ead/Ea22-like family protein | |||
6325 | M | M.StyTORF1914P (100% identity) | M.SenS304ORF6325P | |
6330 | 92 aa hypothetical protein | |||
9635 | PerC family transcriptional regulator | |||
??? | M | M.SenceORFKP (100% identity) | M.SenS304ORF9640P | |
9645 | RusA family crossover junction | |||
9885 | phosphohydrolase | |||
9890 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenS304DcmP |
9895 | V | V.StyUK1DcmP (100% identity) | V.SenS304DcmP | |
9900 | drug/metabolite exporter YedA | |||
20435 | BREX system P-loop protein BrxC | |||
20440 | RM | StyUK1IV (100% identity) | GATCAG | SenS304ORF20440P |
20445 | AAA family ATPase | |||
21915 | LexA family transcriptional regulator | |||
21920 | M | M.SflLIN17ORF20615P (100% identity) | GATC | M.SenS304ORF21920P |
21925 | PerC family transcriptional regulator | |||
plasmid pS304_1 | ||||
24650 | 55 aa hypothetical protein | |||
24655 | M | M.YpsF1ORFCP (100% identity) | M.SenS304ORF24655P | |
24660 | thermonuclease family protein | |||
25225 | 48 aa hypothetical protein | |||
25230 | M | M.YpsF1ORFBP (100% identity) | M.SenS304ORF25230P | |
25235 | 202 aa hypothetical protein | |||
25340 | DNA-binding protein | |||
25345 | M | M.YpsF1ORFDP (100% identity) | M.SenS304ORF25345P | |
25350 | 284 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
17980 | 33 aa hypothetical protein | |||
17985 | R | StyUK1IP (99% identity) | CAGAG | SenS304ORF17990P |
17990 | M | M.StyUK1I (100% identity) | CAGAG | M.SenS304ORF17990P |
17995 | MFS transporter | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
20270 | BrnT family toxin | |||
20275 | R | StyUK1MrrP (100% identity) | SenS304Mrr2P | |
20280 | type I restriction-modification system |