Escherichia coli RHB28-C04 |
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Putative Escherichia coli RHB28-C04 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,481,618 bp | CP057390 |
| plasmid pRHB28-C04_3: | 44,007 bp | CP057392 |
REBASE acronym: Eco28C04
Org_num: 43094
All begin HVY49_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5215 | GTPase family protein | |||
| 5220 | M | M.EcoNT1F25ORFBP (93% identity) | M.Eco28C04ORF5220P | |
| 5225 | S | S.Eco41C07ORF5215P (100% identity) | S.Eco28C04ORF5220P | |
| 5230 | R | Eco819ORF3430P (100% identity) | Eco28C04ORF5220P | |
| 5235 | transposase domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1665 | cell division protein DamX | |||
| 1670 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco28C04DamP |
| 1675 | ribulose-phosphate 3-epimerase | |||
| 2290 | DUF2556 family protein | |||
| 2295 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco28C04ORF2295P |
| 2300 | DNA-binding transcriptional regulator Fis | |||
| 8705 | phosphohydrolase | |||
| 8710 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco28C04DcmP |
| 8715 | V | V.SflSTLE1DcmP (100% identity) | V.Eco28C04DcmP | |
| 8720 | drug/metabolite exporter YedA | |||
| 18610 | HNH endonuclease | |||
| 18615 | R | SflSTLE4ORF19250P (48% identity) | Eco28C04ORF18615P | |
| 18620 | IS1 family transposase | |||
| plasmid pRHB28-C04_3 | ||||
| 21895 | IS1380-like element ISEc9 family transposase | |||
| 21900 | R | EcoPK6ORF23325BP (100% identity) | CCWGG | R2.Eco28C04ORF21905P |
| 21905 | M | M.SflSTLE4ORF22820P (100% identity) | CCWGG | M.Eco28C04ORF21905P |
| 21910 | IS1 family transposase | |||