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Putative Escherichia coli RHBSTW-00343 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
Complete sequence: 5,131,043 bp
GenBank #: CP056594
REBASE acronym: Eco343
Org_num: 43023
All begin HV168_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
11980 | DUF4942 domain-containing protein | |||
11985 | M | M.SsoSE61ORF6540P (100% identity) | GACNNNNNNRTAAY | M.Eco343ORF11985P |
11990 | S | S.SsoSE61ORF6540P (100% identity) | GACNNNNNNRTAAY | S.Eco343ORF11985P |
11995 | R | SflFF22ORF2075P (100% identity) | GACNNNNNNRTAAY | Eco343ORF11985P |
12000 | integrase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
745 | phosphohydrolase | |||
750 | M | M.EcosPA11DcmP (100% identity) | CCWGG | M.Eco343DcmP |
755 | V | V.EcosPA11DcmP (100% identity) | V.Eco343DcmP | |
760 | drug/metabolite exporter YedA | |||
13340 | phage holin, lambda family | |||
13345 | M | M.EfeC23ORF5790P (100% identity) | M.Eco343ORF13345P | |
13350 | TrmB family transcriptional regulator | |||
13375 | LexA family transcriptional regulator | |||
13380 | M | M.SflN101ORF11410P (100% identity) | GATC | M.Eco343ORF13380P |
13385 | PerC family transcriptional regulator | |||
17045 | cell division protein DamX | |||
17050 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco343DamP |
17055 | ribulose-phosphate 3-epimerase | |||
17600 | DUF2556 family protein | |||
17605 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco343ORF17605P |
17610 | DNA-binding transcriptional regulator Fis | |||
22195 | DUF1382 family protein | |||
22200 | M | M.EcoWP4ORF12630P (97% identity) | M.Eco343ORF22200P | |
22205 | PerC family transcriptional regulator |