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Putative Escherichia coli NCTC9707 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,274,845 bp
GenBank #: UGGC00000000 (NZ_UGGC00000000)
REBASE acronym: EcoC9707
Org_num: 43862
All begin NCTC9707_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
975 | restriction methylase | |||
976 | M | M.EcoS6995ORFEP (100% identity) | CYYANNNNNNRTGA | M.EcoC9707I |
977 | S | S.EcoPEC0009ORF18310P (100% identity) | CYYANNNNNNRTGA | S.EcoC9707I |
978 | R | EcoS6995ORFEP (100% identity) | CYYANNNNNNRTGA | EcoC9707IP |
979 | transposase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
36 | cytoplasmic protein | |||
37 | M | M.Sso866ORF27155P (100% identity) | M.EcoC9707ORF37P | |
38 | transposase of ISEc13 | |||
4083 | phosphohydrolase | |||
4084 | M | M.EcoSC477DcmP (100% identity) | CCWGG | M.EcoC9707DcmP |
4085 | V | V.EcoSC477DcmP (100% identity) | V.EcoC9707DcmP | |
4086 | DMT superfamily transporter inner | |||
3609 | YfdA | |||
3610 | M | M.SenBR027ORFEP (100% identity) | SAY | M.EcoC9707ORF3610P |
3611 | cytoplasmic protein | |||
146 | cytoplasmic protein | |||
147 | M | M.Sso866ORF27155P (100% identity) | M.EcoC9707ORF147P | |
148 | transposase of ISEc13 | |||
4016 | lipoprotein | |||
4017 | M | M.EcoS7438ORFNP (99% identity) | M.EcoC9707ORF4017P | |
4021 | anti-adapter protein IraM | |||
4895 | transposase subunit | |||
??? | M | M.Eal9362ORFHP (100% identity) | M.EcoC9707ORF4898P | |
4900 | transposase | |||
971 | endonuclease | |||
972 | R | EcoE234869ORFAP (99% identity) | EcoC9707ORF972P | |
973 | McrC family protein, McrBC 5-methylcytosine | |||
2110 | DamX protein | |||
2111 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC9707Dam |
2112 | ribulose-phosphate 3-epimerase | |||
2216 | membrane protein | |||
2217 | M | M.EcoS6995ORFBP (100% identity) | ATGCAT | M.EcoC9707ORF2217P |
2218 | DNA-binding protein Fis | |||
3223 | Predicted ATP-binding protein involved in | |||
3224 | M | M.EcoWH333ORF4405P (100% identity) | TGGCCA | M.EcoC9707II |
3225 | phage replication protein | |||
3470 | lipoprotein | |||
3471 | M | M.EcoS6995ORFAP (99% identity) | M.EcoC9707ORF3471P | |
3476 | YjhS | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
972 | restriction endonuclease | |||
973 | R | EcoS6995McrCP (100% identity) | EcoC9707McrCP | |
974 | R | EcoS6995McrBP (100% identity) | EcoC9707McrBP | |
975 | restriction methylase |