Escherichia coli O145:H28 112648 |
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Putative Escherichia coli O145:H28 112648 RM systems
Ref: Nakamura,K. et al. unpublished
REBASE ref # 29325
| Sequence length: | GenBank #: | |
| Chromosome: | 5,488,534 bp | AP019706 |
| plasmid pO145_112648_1: | 91,036 bp | AP019707 |
REBASE acronym: Eco112648
Org_num: 36762
All begin EC112648_, EC112648_p
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2469 | metal-dependent hydrolase | |||
| 2470 | R | EcoSO173ORF28895P (100% identity) | GATGNNNNNNTAC | Eco112648ORF2474P |
| 2471 | 620 aa hypothetical protein | |||
| 2472 | SEC-C family protein | |||
| 2473 | S | S.EcoSO173ORF28895P (100% identity) | GATGNNNNNNTAC | S.Eco112648ORF2474P |
| 2474 | M | M.Eco122715ORF2280P (100% identity) | GATGNNNNNNTAC | M.Eco112648ORF2474P |
| 2475 | IS629 transposase OrfA | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 744 | NinB family protein | |||
| 745 | M | M.EcoTrh52ORF21975P (100% identity) | GATC | M.Eco112648ORF745P |
| 746 | NinE protein | |||
| 1116 | recombination protein | |||
| 1117 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco112648ORF1117P |
| 1118 | phage antirepressor protein | |||
| 1644 | 65 aa hypothetical protein | |||
| ??? | M | M.EcoAVFP3ORFEP (98% identity) | M.Eco112648ORFAP | |
| 1645 | DNA methylase | |||
| 2048 | 116 aa hypothetical protein | |||
| 2049 | M | M.EcoTWORF1742P (100% identity) | M.Eco112648ORF2049P | |
| 2050 | 106 aa hypothetical protein | |||
| 2405 | Shiga toxin 2 subunit A | |||
| ??? | M | M.EcoZ1836ORF11435P (100% identity) | M.Eco112648ORF1645P | |
| 2407 | 65 aa hypothetical protein | |||
| 2577 | amino acid exporter for phenylalanine | |||
| 2578 | V | V.SsoSE61DcmP (100% identity) | V.Eco112648DcmP | |
| 2579 | M | M.EcoXJ63DcmP (100% identity) | CCWGG | M.Eco112648DcmP |
| 2580 | HD superfamily phosphohydrolase | |||
| 3362 | 586 aa hypothetical protein | |||
| 3363 | M | M.EcoTrh52ORF21975P (100% identity) | GATC | M.Eco112648ORF3363P |
| 3364 | IS629 transposase OrfA | |||
| 3984 | global DNA-binding transcriptional dual | |||
| 3985 | M | M.SflWW1ORF2205P (100% identity) | ATGCAT | M.Eco112648ORF3985P |
| 3986 | uncharacterized protein YhdU | |||
| 4083 | D-ribulose-5-phosphate 3-epimerase | |||
| 4084 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco112648DamP |
| 4085 | cell division protein DamX | |||
| 4689 | 77 aa hypothetical protein | |||
| 4690 | M | M.SflFF35ORF20P (100% identity) | M.Eco112648ORF4690P | |
| 4691 | 330 aa hypothetical protein | |||
| 5111 | 678 aa hypothetical protein | |||
| 5112 | R | Eco3084ORFIP (88% identity) | Eco112648ORF5112P | |
| 5113 | N-acetylneuraminate epimerase | |||
| 5119 | ATP-dependent helicase | |||
| 5120 | RM | EcoE115ORF5155P (100% identity) | Eco112648ORF5120P | |
| plasmid pO145_112648_1 | ||||
| 49 | DUF1281 family protein | |||
| 50 | M | M.EcopO26ORF185P (100% identity) | SAY | M.Eco112648ORF50P |
| 51 | 73 aa hypothetical protein | |||