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Putative Salmonella enterica subsp. enterica ST1539 RM systems
Ref: Kim,E. et al. J. Microbiol. Biotechnol. 29 (6), 962-972 (2019)
REBASE ref # 29029
Sequence length: | GenBank #: | |
Chromosome: | 4,905,039 bp | CP035301 |
plasmid pST1539: | 93,876 bp | CP035302 |
REBASE acronym: Sen1539
Org_num: 35683
All begin ST1539_, ST1539_p
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
3574 | restriction endonuclease | |||
3575 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen1539ORF3576P |
3576 | M | M.StyUK1II (99% identity) | GAGNNNNNNRTAYG | M.Sen1539ORF3576P |
3577 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen1539ORF3576P |
3578 | Toxic protein SymE | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
340 | Cell division protein DamX | |||
341 | M | DNA adenine methylase | GATC | M.Sen1539DamP |
342 | Ribulose-phosphate 3-epimerase | |||
427 | periplasmic protein | |||
428 | M | adenine-specific DNA-methyltransferase | ATGCAT | M.Sen1539ORF428P |
429 | DNA-binding protein Fis | |||
1026 | 75 aa hypothetical protein | |||
1027 | M | M.SspA39ORFGP (100% identity) | GATC | M.Sen1539ORF1027P |
1028 | endonuclease | |||
1113 | 221 aa hypothetical protein | |||
1114 | M | M.Sens29958ORF6205P (100% identity) | M.Sen1539ORF1114P | |
1115 | 217 aa hypothetical protein | |||
1687 | 160 aa hypothetical protein | |||
1688 | M | M.StyUK1V (100% identity) | GATC | M.Sen1539ORF1688P |
1689 | Crossover junction endodeoxyribonuclease RusA | |||
1730 | phosphohydrolase | |||
1731 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen1539DcmP |
1732 | V | Very short patch repair protein | V.Sen1539DcmP | |
1733 | inner membrane transporter YedA | |||
3604 | DNA repair ATPase | |||
??? | RM | SenWarORF11445P (100% identity) | Sen1539ORF3605P | |
3606 | 363 aa hypothetical protein | |||
3863 | Crossover junction endodeoxyribonuclease RusA | |||
3864 | M | M.Sens013ORF21535P (100% identity) | M.Sen1539ORF3864P | |
3865 | phage protein | |||
plasmid pST1539 | ||||
77 | 73 aa hypothetical protein | |||
78 | M | M.StyUK1ORFAP (100% identity) | M.Sen1539ORF78P | |
79 | 156 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
3167 | cytochrome ubiquinol oxidase subunit I | |||
3168 | R | StyUK1IP (99% identity) | CAGAG | Sen1539ORF3169P |
3169 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen1539ORF3169P |
3170 | MFS transporter | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
3573 | membrane protein | |||
3574 | R | StyUK1MrrP (100% identity) | Sen1539MrrP | |
3575 | type I restriction-modification system |