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Putative Escherichia coli FC853_EC RM systems
Ref: Anandan,S. et al. unpublished
REBASE ref # 28855
Sequence length: | GenBank #: | |
Chromosome: | 5,209,476 bp | CP040919 |
plasmid p853EC1: | 97,266 bp | CP040920 |
plasmid p853EC2: | 49,465 bp | CP040921 |
plasmid p853EC3: | 143,714 bp | CP040922 |
REBASE acronym: Eco853
Org_num: 34902
All begin FH485_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
9805 | IS3 family transposase | |||
9810 | M | M.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | M.Eco853ORF9810P |
9815 | S | S.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | S.Eco853ORF9810P |
9820 | YecA family protein | |||
9825 | cold shock domain-containing protein | |||
9830 | R | Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | Eco853ORF9810P |
9835 | M48 family metallopeptidase | |||
20620 | restriction endonuclease | |||
20625 | R | Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | Eco853ORF20630P |
20630 | M | M.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | M.Eco853ORF20630P |
20635 | S | S.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | S.Eco853ORF20630P |
20640 | endoribonuclease SymE | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1110 | cell division protein DamX | |||
1115 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco853DamP |
1120 | ribulose-phosphate 3-epimerase | |||
1645 | DUF2556 domain-containing protein | |||
1650 | M | M.Ecos142ORF2405P (100% identity) | ATGCAT | M.Eco853ORF1650P |
1655 | DNA-binding transcriptional regulator Fis | |||
6100 | 82 aa hypothetical protein | |||
6105 | M | M.SspPIBORF6330P (99% identity) | M.Eco853ORF6105P | |
6110 | PerC family transcriptional regulator | |||
9535 | phosphohydrolase | |||
9540 | M | M.Ecos142DcmP (100% identity) | CCWGG | M.Eco853DcmP |
9545 | V | V.Ecos142DcmP (100% identity) | V.Eco853DcmP | |
9550 | drug/metabolite exporter YedA | |||
13305 | 108 aa hypothetical protein | |||
13320 | M | M.SsoL4094ORF17545P (100% identity) | A | M.Eco853ORF13320P |
13325 | TrmB family transcriptional regulator | |||
15755 | replication endonuclease | |||
15760 | M | M.SspS13ORF8710P (100% identity) | GATC | M.Eco853ORF15760P |
15765 | TraR/DksA family transcriptional regulator | |||
22595 | LexA family transcriptional regulator | |||
22600 | M | M.SflN101ORF11410P (100% identity) | GATC | M.Eco853ORF22600P |
22605 | PerC family transcriptional regulator | |||
plasmid p853EC1 | ||||
25610 | 61 aa hypothetical protein | |||
25625 | M | M.Eco0068ORF25605P (100% identity) | M.Eco853ORF25625P | |
25630 | recombination-associated protein RdgC | |||
plasmid p853EC2 | ||||
26285 | 89 aa hypothetical protein | |||
26290 | M | M.EcoNDM5ORFCP (100% identity) | M.Eco853ORF26290P | |
26300 | 92 aa hypothetical protein | |||
plasmid p853EC3 | ||||
27460 | 0 aa hypothetical protein | |||
27465 | M | 67 aa hypothetical protein | M.Eco853ORF27465P | |
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
plasmid p853EC1 | ||||
25920 | modulator protein | |||
25925 | M | M.SenSL0052ORF25975P (100% identity) | AGACC | M.Eco853ORF25925P |
25930 | R | SenSL0052ORF25975P (100% identity) | AGACC | Eco853ORF25925P |
25935 | maturation control protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
20615 | GTPase | |||
20620 | R | Ssp28760MrrP (100% identity) | Eco853MrrP | |
20625 | type I restriction-modification system | |||
20640 | endoribonuclease SymE | |||
20645 | R | SenHNK130McrBP (100% identity) | Eco853McrBP | |
20650 | R | SenHNK130McrCP (100% identity) | Eco853McrCP |