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Putative Escherichia coli U12A RM systems
Ref: Forde,B.M. et al. unpublished
REBASE ref # 28281
Sequence length: | GenBank #: | |
Chromosome: | 5,018,242 bp | CP035476 |
plasmid pU12A_A: | 151,747 bp | CP035468 |
plasmid pU12A_B: | 87,354 bp | CP035469 |
plasmid pU12A_C: | 69,518 bp | CP035470 |
REBASE acronym: EcoU12A
Org_num: 33598
All begin U12A_, U12A_A, U12A_B, U12A_C
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
294 | 156 aa hypothetical protein | |||
295 | S | S.EcosST131ORF19430P (100% identity) | AAAGNNNNGTT | S.EcoU12AORF296P |
296 | M | M.EcosST131ORF19430P (100% identity) | AAAGNNNNGTT | M.EcoU12AORF296P |
297 | R | EcosST131ORF19430P (100% identity) | AAAGNNNNGTT | EcoU12AORF296P |
298 | 260 aa hypothetical protein | |||
4760 | Toxic protein SymE | |||
4761 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoU12AORF4763P |
4762 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoU12AORF4763P |
4763 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoU12AORF4763P |
4764 | Mrr restriction system protein | |||
plasmid pU12A_A | ||||
85 | 167 aa hypothetical protein | |||
86 | R | KpnKPH1ORF27575P (100% identity) | CAAYNNNNNNCTGG | EcoU12AORF88P |
87 | S | S.SenceORFJP (100% identity) | CAAYNNNNNNCTGG | S.EcoU12AORF88P |
88 | M | M.SenceORFJP (99% identity) | CAAYNNNNNNCTGG | M.EcoU12AORF88P |
89 | 73 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
977 | 71 aa hypothetical protein | |||
978 | M | M.KpnYN1ORFGP (89% identity) | M.EcoU12AORF978P | |
979 | HTH-type transcriptional regulator ImmR | |||
1422 | 65 aa hypothetical protein | |||
1423 | M | M.EcosST131ORF13660P (100% identity) | A | M.EcoU12AORF1423P |
1426 | Anti-adapter protein IraM | |||
2099 | inner membrane transporter YedA | |||
2100 | V | V.SflC32DcmP (74% identity) | V.EcoU12ADcmP | |
2101 | M | M.Ecost536DcmP (100% identity) | CCWGG | M.EcoU12ADcmP |
2102 | 231 aa hypothetical protein | |||
3495 | DNA-binding protein Fis | |||
3496 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoU12AORF3496P |
3497 | 59 aa hypothetical protein | |||
3615 | Ribulose-phosphate 3-epimerase | |||
3616 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoU12ADamP |
3617 | Cell division protein DamX | |||
4693 | 141 aa hypothetical protein | |||
4694 | M | M2.EcosST131ORF21615P (100% identity) | M1.EcoU12AORF4694P | |
4695 | M | M1.EcosST131ORF21615P (100% identity) | GGTCTC | M2.EcoU12AORF4694P |
4696 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoU12AORF4694P |
4697 | 428 aa hypothetical protein | |||
plasmid pU12A_A | ||||
72 | 73 aa hypothetical protein | |||
73 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoU12AORF73P |
74 | 103 aa hypothetical protein | |||
plasmid pU12A_B | ||||
55 | 73 aa hypothetical protein | |||
56 | M | M.SspPIBORF23080P (100% identity) | M.EcoU12AORF56P | |
57 | 70 aa hypothetical protein | |||
plasmid pU12A_C | ||||
22 | 308 aa hypothetical protein | |||
23 | M | M.Sfl7ORF23565P (100% identity) | M.EcoU12AORF23P | |
24 | 73 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
4696 | 579 aa hypothetical protein | |||
??? | R | EcosST131McrCP (100% identity) | EcoU12AMcrCP | |
4698 | R | EcosST131McrBP (100% identity) | EcoU12AMcrBP | |
4699 | teichuronic acid biosynthesis |