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Putative Salmonella enterica subsp. enterica serovar Typhi 311189_223186 RM systems
Ref: Tanmoy,A.M.T. et al. unpublished
REBASE ref # 27692
Sequence length: | GenBank #: | |
Chromosome: | 4,783,762 bp | CP029880 |
plasmid pHCM1: | 214,596 bp | CP029879 |
REBASE acronym: Sen223186
Org_num: 31620
All begin SM223186_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
5964 | endoribonuclease SymE | |||
5966 | S | S.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | S.Sen223186ORF5966P |
??? | M | M.SenTY585ORFHP (100% identity) | GAANNNNNNNNTCGC | M.Sen223186ORF5966P |
5968 | R | StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | Sen223186ORF5966P |
5970 | mrr restriction system protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1417 | bacteriophage protein | |||
125 | M | M.StyTORF1926P (100% identity) | M.Sen223186ORF125P | |
1418 | bacteriophage protein | |||
1428 | bacteriophage protein | |||
118 | M | M.StyTORF1914P (100% identity) | M.Sen223186ORF118P | |
1430 | bacteriophage protein | |||
4386 | DMT superfamily transporter inner membrane | |||
2611 | V | V.StyTDcmP (100% identity) | V.Sen223186DcmP | |
2617 | M | M.StyTDcmP (100% identity) | CCWGG | M.Sen223186DcmP |
2621 | 231 aa hypothetical protein | |||
246 | Fis DNA-binding protein | |||
249 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen223186ORF249P |
252 | 54 aa hypothetical protein | |||
2877 | 75 aa hypothetical protein | |||
2900 | M | M.StyTORF3409P (100% identity) | GATC | M.Sen223186ORF2900P |
2942 | endonuclease | |||
5270 | cell division protein DamX | |||
5268 | M | DNA adenine methylase | GATC | M.Sen223186DamP |
5271 | ribulose-phosphate 3-epimerase | |||
5681 | bacteriophage replication protein A | |||
5679 | M | M.StyTORF4329P (100% identity) | M.Sen223186ORF5679P | |
5683 | exonuclease | |||
plasmid pHCM1 | ||||
7089 | 385 aa hypothetical protein | |||
7071 | M | M.Ype21801ORF197P (100% identity) | M.Sen223186ORF7071P | |
7082 | 273 aa hypothetical protein | |||
7200 | 439 aa hypothetical protein | |||
7201 | M | M.StypAKU1ORFCP (100% identity) | M.Sen223186ORF7201P | |
7195 | nuclease | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
328 | metabolite transport protein | |||
327 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen223186ORF327P |
??? | R | StyTORF2507P (100% identity) | CAGAG | Sen223186ORF327P |
725 | terminal oxidase subunit I | |||
2631 | 462 aa hypothetical protein | |||
2633 | M | M.SmaBWH35ORF16840P (100% identity) | M.Sen223186ORF2633P | |
2635 | R | StyTORF872P (100% identity) | Sen223186ORF2633P | |
553 | PilV-like protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
5968 | subunit R of type I restriction-modification | |||
5970 | R | StyTMrrP (100% identity) | Sen223186MrrP | |
5969 | 95 aa hypothetical protein |