Salmonella enterica subsp. enterica serovar Typhimurium OLF-FSR1-STCopenhagen-53 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium OLF-FSR1-STCopenhagen-53 RM systems
Ref: Duceppe,M.-O. et al. unpublished
REBASE ref # 27136
Contig set: 4,849,409 bp
GenBank #: PYUZ00000000 (NZ_PYUZ00000000)
REBASE acronym: SenC53
Org_num: 31141
All begin C5H99_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 23585 | endoribonuclease SymE | |||
| 23590 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenC53ORF23595P |
| 23595 | M | M.StyUK1II (100% identity) | GAGNNNNNNRTAYG | M.SenC53ORF23595P |
| 23600 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenC53ORF23595P |
| 23605 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10415 | RusA family crossover junction | |||
| 10420 | M | M.StyUK1V (100% identity) | GATC | M.SenC53ORF10420P |
| 10425 | 174 aa hypothetical protein | |||
| 18220 | ribulose-phosphate 3-epimerase | |||
| 18225 | M | M.StyTDamP (100% identity) | GATC | M.SenC53DamP |
| 18230 | cell division protein DamX | |||
| 10160 | drug/metabolite exporter YedA | |||
| 10165 | V | V.StyUK1DcmP (100% identity) | V.SenC53DcmP | |
| 10170 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenC53DcmP |
| 10175 | phosphohydrolase | |||
| 17735 | Fis family transcriptional regulator | |||
| 17740 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenC53ORF17740P |
| 17745 | DUF2556 domain-containing protein | |||
| 24535 | 62 aa hypothetical protein | |||
| 24540 | M | M.StyUK1ORFAP (100% identity) | M.SenC53ORF24540P | |
| 24545 | 73 aa hypothetical protein | |||
| 23415 | 363 aa hypothetical protein | |||
| 23420 | RM | StyUK1IV (100% identity) | GATCAG | SenC53ORF23420P |
| 23425 | BREX system P-loop protein BrxC | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1580 | MFS transporter | |||
| 1585 | M | M.StyUK1I (100% identity) | CAGAG | M.SenC53ORF1585P |
| 1590 | R | StyUK1IP (99% identity) | CAGAG | SenC53ORF1585P |
| 1595 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23600 | type I restriction-modification system | |||
| 23605 | R | StyUK1MrrP (100% identity) | SenC53MrrP | |
| 23610 | 95 aa hypothetical protein | |||