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Putative Neisseria gonorrhoeae 980040-18 RM systems
Ref: Hirk,S. et al. unpublished
REBASE ref # 26993
Contig set: 2,232,201 bp
GenBank #: PTPO00000000 (NZ_PTPO00000000)
REBASE acronym: Ngo4018
Org_num: 30950
All begin C5B26_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
4600 | ATP-dependent Clp protease ATP-binding subunit | |||
4605 | R | Ngos1291ORF7750P (100% identity) | Ngo4018ORF4625P | |
4610 | sodium:proton exchanger | |||
4615 | S | S.NgoWNII (100% identity) | S.Ngo4018ORF4625P | |
4620 | DNA damage-inducible protein D | |||
4625 | M | M.Ngo4718ORF1640P (100% identity) | M.Ngo4018ORF4625P | |
4630 | ADP-L-glycero-D-mannoheptose-6-epimerase | |||
7970 | replication-associated recombination protein A | |||
7975 | R | NgoWOIP (100% identity) | GAGNNNNNTAC | Ngo4018ORF8000P |
7980 | hydroxyacid dehydrogenase | |||
7985 | S | S.Ngos1291I (100% identity) | GAGNNNNNTAC | S.Ngo4018ORF8000P |
7990 | 186 aa hypothetical protein | |||
7995 | 0 aa hypothetical protein | |||
8000 | M | M.Ngos1291I (100% identity) | GAGNNNNNTAC | M.Ngo4018ORF8000P |
8005 | ABC transporter | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
12405 | replication initiation factor | |||
12410 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo4018ORF12420P | |
??? | R | NgoTFGB2ORF1219P (100% identity) | Ngo4018ORF12420P | |
??? | M | M.Ngos1291ORF65P (100% identity) | M.Ngo4018ORF12420P | |
12430 | 48 aa hypothetical protein | |||
11490 | transposase | |||
11495 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo4018ORF11495P |
11500 | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo4018ORF11495P |
11505 | excinuclease ABC subunit UvrA | |||
7855 | 3-isopropylmalate dehydrogenase | |||
7860 | R | Ngos1291ORF9120P (100% identity) | GGNNCC | Ngo4018ORF7865P |
7865 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo4018ORF7865P |
7870 | 3-isopropylmalate dehydratase small subunit | |||
7240 | leucine--tRNA ligase | |||
7245 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo4018ORF7245P |
7250 | DNA adenine methylase | |||
7250 | DNA adenine methylase | |||
7255 | M | site-specific DNA-methyltransferase | M1.Ngo4018ORF7255P | |
7260 | M | site-specific DNA-methyltransferase | M2.Ngo4018ORF7255P | |
7265 | 0 aa hypothetical protein | |||
2450 | GTPase ObgE | |||
2455 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo4018ORF2455P |
2460 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo4018ORF2455P |
2465 | cysteine--tRNA ligase | |||
6925 | 93 aa hypothetical protein | |||
??? | R | Ngo4318ORF6975P (100% identity) | GGTGA | Ngo4018ORF6935P |
6935 | M | M1.NgoFQ35ORF11380P (100% identity) | GGTGA | M1.Ngo4018ORF6935P |
6940 | M | M1.NgoWSIII (100% identity) | GGTGA | M2.Ngo4018ORF6935P |
6945 | RNA-binding transcriptional accessory protein | |||
5065 | group 2 glycosyl transferase | |||
5070 | R | Ngos1291ORF3515P (100% identity) | GGCC | Ngo4018ORF5075P |
5075 | M | M.NgoSH240ORFKP (100% identity) | GGCC | M.Ngo4018ORF5075P |
5080 | ribosome-recycling factor | |||
810 | phenylalanine--tRNA ligase subunit alpha | |||
815 | V | V.NgoWSORF391P (100% identity) | V.Ngo4018ORF820P | |
??? | M | M.NgoTFGB2ORF299P (100% identity) | M.Ngo4018ORF820P | |
830 | R | NgoWSORF391P (100% identity) | Ngo4018ORF820P | |
835 | phenylalanine--tRNA ligase subunit beta | |||
2290 | anthranilate synthase component I | |||
2295 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.Ngo4018ORF2295P |
2300 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo4018ORF2295P |
2305 | 5-(carboxyamino)imidazole ribonucleotide | |||
1125 | IS1595 family transposase | |||
1130 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | Ngo4018ORF1130P |
1135 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.Ngo4018ORF1130P |
1140 | 0 aa hypothetical protein | |||
1165 | uroporphyrinogen decarboxylase | |||
??? | H | H.Ngo4718ORF645P (100% identity) | H.Ngo4018ORF1180P | |
1175 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo4018ORF1180P |
1180 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo4018ORF1180P |
1185 | 60 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
11815 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
11820 | R | NgoWPIIP (100% identity) | CCACC | Ngo4018ORF11825P |
11825 | M | M.Ngos1291ORF8455P (100% identity) | CCACC | M.Ngo4018ORF11825P |
5885 | tRNA pseudouridine(55) synthase TruB | |||
??? | M | M.Ngo4318ORF5715P (100% identity) | M.Ngo4018ORF5890P | |
5900 | R | Ngos1291ORF8930P (100% identity) | Ngo4018ORF5890P | |
5905 | alpha-hydroxy-acid oxidizing protein |