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Putative Nocardia farcinica W6977 RM systems
Ref: Gulvik,C.A. unpublished
REBASE ref # 27326
Sequence length: | GenBank #: | |
Chromosome: | 6,291,633 bp | CP031418 |
plasmid unnamed1: | 96,709 bp | CP031419 |
plasmid unnamed2: | 41,292 bp | CP031420 |
REBASE acronym: NfaW6977
Org_num: 30501
All begin DXT66_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
3145 | beta-phosphoglucomutase family hydrolase | |||
3155 | R | Nfa11134IIP (100% identity) | GACNNNNNCTAC | NfaW6977ORF3175P |
3160 | ATP-binding protein | |||
3165 | restriction endonuclease | |||
??? | S | S.Nfa469ORF26P (100% identity) | GACNNNNNCTAC | S.NfaW6977ORF3175P |
3175 | M | M.Nfa11134II (100% identity) | GACNNNNNCTAC | M.NfaW6977ORF3175P |
3180 | alpha/beta hydrolase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
8690 | 369 aa hypothetical protein | |||
8695 | M | M.Rrh630ORF3379P (100% identity) | M.NfaW6977ORF8695P | |
8700 | DUF732 domain-containing protein | |||
8710 | 104 aa hypothetical protein | |||
??? | RM | Nfa469ORF5479P (99% identity) | NfaW6977ORF8720P | |
8725 | DUF4433 domain-containing protein | |||
9155 | TetR/AcrR family transcriptional regulator | |||
9160 | M | M.Nfa11134I (100% identity) | ATCGAT | M.NfaW6977ORF9160P |
9165 | nitroreductase | |||
16230 | 189 aa hypothetical protein | |||
16235 | M | M.NfaORF2340P (99% identity) | M.NfaW6977ORF16235P | |
16240 | V | V.Rrh630ORF4853P (100% identity) | V.NfaW6977ORF16235P | |
16245 | DUF998 domain-containing protein | |||
25370 | transcriptional regulator | |||
25375 | RM | Nfa469ORF5774P (97% identity) | NfaW6977ORF25375P | |
25380 | 83 aa hypothetical protein | |||
25610 | 85 aa hypothetical protein | |||
25615 | M | M.Nfa469ORF5803P (100% identity) | M.NfaW6977ORF25615P | |
25620 | 320 aa hypothetical protein | |||
plasmid unnamed1 | ||||
29825 | 234 aa hypothetical protein | |||
29830 | M | M.Nfa469ORF5367P (100% identity) | M.NfaW6977ORF29830P | |
29835 | 314 aa hypothetical protein | |||
plasmid unnamed2 | ||||
30195 | 71 aa hypothetical protein | |||
30200 | M | M.Nsp372ORF29575P (99% identity) | M.NfaW6977ORF30200P | |
30205 | phage Gp37/Gp68 family protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
3160 | ATP-binding protein | |||
3165 | R | Nfa11134MrrP (94% identity) | NfaW6977MrrP | |
3170 | 361 aa hypothetical protein |